D. rerio Gene: yif1a - ENSDARG00000019636 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000019636
Nameyif1a
DescriptionYip1 interacting factor homolog A (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-6922]
OrganismDanio rerio (zebrafish)
Synonym(s)fa11c09, fk27h03, q7zv12, wu:fa11c09, wu:fk27h03, zgc:73136

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreSources
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.06e3
  • 1.06e3
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.14e3
  • 1.14e3
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
2.05e3
  • 2.05e3
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
2.46e3
  • 2.46e3
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
2.63e3
  • 2.63e3
  • 3.75e3
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
2.64e3
  • 2.64e3
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
3.13e3
  • 3.13e3
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
3.28e3
  • 3.28e3
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000037Larval:Day 5
  • ZFS:0000020Gastrula:75%-epiboly
3.36e3
  • 3.36e3
  • 4.32e3
  • 5.47e3
  • 5.51e3
  • 5.53e3
  • 5.55e3
  • 5.75e3
  • 5.94e3
  • 6.43e3
  • 7.18e3
  • 7.59e3
  • 8.53e3
  • 8.67e3
  • 8.70e3
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000037Larval:Day 5
3.45e3
  • 3.45e3
  • 3.67e3
  • 4.05e3
  • 4.24e3
  • 4.33e3
  • 4.36e3
  • 4.80e3
  • 4.88e3
  • 5.18e3
  • 7.10e3
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
3.48e3
  • 3.48e3
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
3.58e3
  • 3.58e3
  • 6.88e3
AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
3.80e3
  • 3.80e3
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
3.85e3
  • 3.85e3
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
4.33e3
  • 4.33e3
  • 6.81e3
AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
4.55e3
  • 4.55e3
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
4.65e3
  • 4.65e3
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
4.68e3
  • 4.68e3
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
4.74e3
  • 4.74e3
  • 6.13e3
  • 8.17e3
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
4.88e3
  • 4.88e3
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
5.12e3
  • 5.12e3
  • 1.11e4
  • 1.20e4
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
5.36e3
  • 5.36e3
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
5.37e3
  • 5.37e3
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
5.63e3
  • 5.63e3
  • 6.85e3
  • 7.40e3
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
5.71e3
  • 5.71e3
  • 6.22e3
  • 7.29e3
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
6.02e3
  • 6.02e3
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
6.13e3
  • 6.13e3
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000020Gastrula:75%-epiboly
6.22e3
  • 6.22e3
  • 7.04e3
  • 7.11e3
  • 7.86e3
  • 8.51e3
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
6.28e3
  • 6.28e3
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
6.83e3
  • 6.83e3
  • 8.46e3
  • 8.71e3
  • 8.71e3
  • 8.88e3
  • 9.05e3
  • 9.05e3
  • 9.05e3
  • 9.62e3
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
9.87e3
  • 9.87e3
  • 9.87e3
  • 1.06e4
  • 1.06e4
  • 1.11e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000151pectoral fin
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
9.87e3
  • 9.87e3
  • 1.02e4
AEIR
  • AEIR
  • AEIR
UBERON:2000083ventral mesoderm
  • ZFS:0000026Segmentation:14-19 somites
1.22e4
  • 1.22e4
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation
Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.
Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLBC046046, BC059499, BC071433
EnsemblENSDARG00000019636 (yif1a)
Uniprot/SWISSPROTQ6PC24, YIF1A_DANRE
ZFINZDB-GENE-030131-6922 (yif1a)

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