D. rerio Gene: zgc:162239 - ENSDARG00000019651 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000019651
Namezgc:162239
Descriptionzgc:162239 [Source:ZFIN;Acc:ZDB-GENE-070424-28]
OrganismDanio rerio (zebrafish)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
148
  • 148
  • 1.32e4
99.51
  • 99.51
  • 55.70
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
6.49e3
  • 6.49e3
78.27
  • 78.27
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.16e4
  • 1.16e4
61.24
  • 61.24
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.26e4
  • 1.26e4
  • 1.64e4
57.79
  • 57.79
  • 44.96
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.27e4
  • 1.27e4
57.32
  • 57.32
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.29e4
  • 1.29e4
56.95
  • 56.95
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.44e4
  • 1.44e4
51.78
  • 51.78
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.46e4
  • 1.46e4
51.03
  • 51.03
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.47e4
  • 1.47e4
50.87
  • 50.87
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.47e4
  • 1.47e4
50.78
  • 50.78
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.57e4
  • 1.57e4
47.47
  • 47.47
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.58e4
  • 1.58e4
46.97
  • 46.97
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.59e4
  • 1.59e4
46.80
  • 46.80
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.61e4
  • 1.61e4
46.20
  • 46.20
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.65e4
  • 1.65e4
44.68
  • 44.68
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
1.86e4
  • 1.86e4
  • 1.89e4
  • 1.96e4
  • 2.13e4
  • 2.17e4
37.62
  • 37.62
  • 36.81
  • 34.24
  • 28.57
  • 27.28
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
2.02e4
  • 2.02e4
  • 2.28e4
32.43
  • 32.43
  • 23.69
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EnsemblENSDARG00000019651 (zgc:162239)
ZFINZDB-GENE-070424-28 (zgc:162239)
EMBLBX649570
Uniprot/SPTREMBLE9QC85, E9QC85_DANRE, F1QS91, F1QS91_DANRE

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