D. rerio Gene: colq - ENSDARG00000019692 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000019692
Namecolq
Descriptioncollagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase [Source:ZFIN;Acc:ZDB-GENE-110411-119]
OrganismDanio rerio (zebrafish)
Synonym(s)si:dkeyp-86h10.5

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.29e4
  • 1.29e4
56.35509
  • 56.35509
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
1.37e4
  • 1.37e4
53.73446
  • 53.73446
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
1.47e4
  • 1.47e4
  • 1.56e4
  • 1.74e4
  • 1.77e4
  • 1.86e4
50.26448
  • 50.26448
  • 47.28755
  • 41.19443
  • 40.15176
  • 36.99285
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.65e4
  • 1.65e4
44.18738
  • 44.18738
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.74e4
  • 1.74e4
41.26347
  • 41.26347
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.79e4
  • 1.79e4
39.44306
  • 39.44306
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.92e4
  • 1.92e4
34.96020
  • 34.96020
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.94e4
  • 1.94e4
34.37210
  • 34.37210
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.00e4
  • 2.00e4
32.40921
  • 32.40921
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.10e4
  • 2.10e4
28.87973
  • 28.87973
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLBX890611, CR524826
EnsemblENSDARG00000019692 (colq)
Uniprot/SPTREMBLF1Q7Y1, F1Q7Y1_DANRE
ZFINZDB-GENE-110411-119 (colq)

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