D. rerio Gene: clcn5a - ENSDARG00000019693 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000019693
Nameclcn5a
Descriptionchloride channel, voltage-sensitive 5a [Source:ZFIN;Acc:ZDB-GENE-091113-15]
OrganismDanio rerio (zebrafish)
Synonym(s)si:dkey-22f5.8
Orthologs(s)26 orthologs
Paralog(s)6 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
2.41e3
  • 2.41e3
91.95
  • 91.95
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
5.26e3
  • 5.26e3
82.40
  • 82.40
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
6.09e3
  • 6.09e3
79.61
  • 79.61
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
6.26e3
  • 6.26e3
79.06
  • 79.06
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
6.32e3
  • 6.32e3
78.83
  • 78.83
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
6.47e3
  • 6.47e3
78.32
  • 78.32
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
6.86e3
  • 6.86e3
  • 1.02e4
77.03
  • 77.03
  • 65.79
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
6.89e3
  • 6.89e3
76.95
  • 76.95
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
6.92e3
  • 6.92e3
  • 7.75e3
  • 7.83e3
  • 8.13e3
  • 8.47e3
76.84
  • 76.84
  • 74.06
  • 73.78
  • 72.79
  • 71.65
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
6.99e3
  • 6.99e3
  • 8.05e3
76.58
  • 76.58
  • 73.06
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
7.10e3
  • 7.10e3
76.24
  • 76.24
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
7.37e3
  • 7.37e3
75.31
  • 75.31
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
7.55e3
  • 7.55e3
74.74
  • 74.74
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
7.91e3
  • 7.91e3
73.53
  • 73.53
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
7.98e3
  • 7.98e3
73.27
  • 73.27
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
8.16e3
  • 8.16e3
  • 1.00e4
72.68
  • 72.68
  • 66.53
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
8.44e3
  • 8.44e3
  • 9.26e3
71.75
  • 71.75
  • 69.01
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
8.48e3
  • 8.48e3
71.61
  • 71.61
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
8.71e3
  • 8.71e3
70.84
  • 70.84
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
9.03e3
  • 9.03e3
  • 1.06e4
69.77
  • 69.77
  • 64.65
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.00e4
  • 1.00e4
66.42
  • 66.42
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.08e4
  • 1.08e4
63.72
  • 63.72
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.11e4
  • 1.11e4
62.86
  • 62.86
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.18e4
  • 1.18e4
60.53
  • 60.53
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.29e4
  • 1.29e4
56.84
  • 56.84
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi19 species19 genesCompare expression
Bilateria26 species26 genesCompare expression

Orthology information comes from OMA : ENSDARG00000019693.

Paralogs (same species)

Paralogy information comes from OMA : ENSDARG00000019693.

Cross-references

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