D. rerio Gene: hsd3b2 - ENSDARG00000019747 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000019747
Namehsd3b2
Descriptionhydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2 [Source:ZFIN;Acc:ZDB-GENE-030828-2]
OrganismDanio rerio (zebrafish)
Synonym(s)cb723, hsd3b1, zgc:122972
Orthologs(s)30 orthologs
Paralog(s)5 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000109gastrula stage
762
  • 762
  • 1.77e3
  • 2.05e3
  • 2.63e3
  • 4.63e3
  • 7.18e3
97.45
  • 97.45
  • 94.06
  • 93.13
  • 91.20
  • 84.49
  • 75.95
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000030Pharyngula:Prim-15
1.40e3
  • 1.40e3
  • 2.95e3
  • 7.39e3
  • 1.07e4
  • 1.09e4
  • 1.52e4
  • 1.62e4
95.32
  • 95.32
  • 90.14
  • 75.27
  • 64.11
  • 63.40
  • 49.10
  • 45.70
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000026Segmentation:14-19 somites
  • UBERON:0000106zygote stage
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • UBERON:0000109gastrula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
3.40e3
  • 3.40e3
  • 3.93e3
  • 4.03e3
  • 4.78e3
  • 6.27e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 7.47e3
  • 1.34e4
  • 1.35e4
  • 1.43e4
  • 1.47e4
  • 1.49e4
  • 1.79e4
  • 1.80e4
88.62
  • 88.62
  • 86.83
  • 86.52
  • 83.99
  • 79.00
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 74.99
  • 55.14
  • 54.86
  • 52.23
  • 50.90
  • 49.99
  • 40.18
  • 39.85
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000011Blastula:1k-cell
3.68e3
  • 3.68e3
  • 5.71e3
  • 5.73e3
  • 6.29e3
  • 6.66e3
87.67
  • 87.67
  • 80.89
  • 80.81
  • 78.95
  • 77.69
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
5.49e3
  • 5.49e3
  • 1.47e4
81.63
  • 81.63
  • 50.63
AEIR
  • AEIR
  • AEIR
UBERON:2000088YSL
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
6.97e3
  • 6.97e3
  • 6.97e3
  • 6.97e3
  • 8.54e3
  • 1.03e4
  • 1.05e4
  • 1.07e4
  • 1.07e4
  • 1.07e4
76.66
  • 76.66
  • 76.66
  • 76.66
  • 71.42
  • 65.37
  • 64.69
  • 64.27
  • 64.27
  • 64.27
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
7.01e3
  • 7.01e3
76.52
  • 76.52
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
9.34e3
  • 9.34e3
68.73
  • 68.73
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
9.44e3
  • 9.44e3
68.41
  • 68.41
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.08e4
  • 1.08e4
63.79
  • 63.79
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.15e4
  • 1.15e4
61.54
  • 61.54
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.19e4
  • 1.19e4
60.23
  • 60.23
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
1.29e4
  • 1.29e4
  • 1.29e4
  • 1.39e4
  • 1.41e4
56.65
  • 56.65
  • 56.65
  • 53.31
  • 52.75
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.30e4
  • 1.30e4
56.61
  • 56.61
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
1.36e4
  • 1.36e4
54.63
  • 54.63
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.41e4
  • 1.41e4
52.82
  • 52.82
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.48e4
  • 1.48e4
50.33
  • 50.33
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.56e4
  • 1.56e4
47.63
  • 47.63
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
1.77e4
  • 1.77e4
40.89
  • 40.89
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.86e4
  • 1.86e4
37.67
  • 37.67
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.97e4
  • 1.97e4
34.11
  • 34.11
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.37e4
  • 2.37e4
20.62
  • 20.62
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Clupeocephala1 geneCompare expression
Eukaryota5 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000019747.

Cross-references

EnsemblENSDARG00000019747 (hsd3b2)
ZFINZDB-GENE-030828-2 (hsd3b2)
EMBLBX248418
Uniprot/SPTREMBLF1QR80, F1QR80_DANRE, Q5RIL7, Q5RIL7_DANRE, Q5RIL8, Q5RIL8_DANRE

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