D. rerio Gene: rom1a - ENSDARG00000019752 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000019752
Namerom1a
Descriptionretinal outer segment membrane protein 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1765]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:73336, zgc:77401

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
1.52e3
  • 1.52e3
94.90
  • 94.90
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.55e3
  • 1.55e3
  • 2.58e3
94.82
  • 94.82
  • 91.38
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
6.95e3
  • 6.95e3
  • 2.02e4
  • 2.02e4
  • 2.11e4
  • 2.25e4
76.72
  • 76.72
  • 32.42
  • 32.38
  • 29.21
  • 24.69
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.08e4
  • 1.08e4
  • 2.12e4
63.94
  • 63.94
  • 29.03
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.70e4
  • 1.70e4
43.07
  • 43.07
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.71e4
  • 1.71e4
42.89
  • 42.89
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
1.72e4
  • 1.72e4
42.52
  • 42.52
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.78e4
  • 1.78e4
40.32
  • 40.32
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.83e4
  • 1.83e4
38.87
  • 38.87
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.86e4
  • 1.86e4
37.88
  • 37.88
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.19e4
  • 2.19e4
26.54
  • 26.54
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.23e4
  • 2.23e4
25.45
  • 25.45
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

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