D. rerio Gene: C2 - ENSDARG00000019772 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000019772
NameC2
Descriptionsi:ch1073-280e3.1 [Source:ZFIN;Acc:ZDB-GENE-110411-261]
OrganismDanio rerio (zebrafish)
Orthologs(s)14 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0000066fully formed stage
515
  • 515
98.28
  • 98.28
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
3.77e3
  • 3.77e3
87.39
  • 87.39
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
4.71e3
  • 4.71e3
84.22
  • 84.22
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
9.32e3
  • 9.32e3
68.81
  • 68.81
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.38e4
  • 1.38e4
53.66
  • 53.66
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
1.43e4
  • 1.43e4
52.08
  • 52.08
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.46e4
  • 1.46e4
50.96
  • 50.96
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.47e4
  • 1.47e4
50.71
  • 50.71
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.50e4
  • 1.50e4
  • 2.09e4
49.81
  • 49.81
  • 29.97
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
1.86e4
  • 1.86e4
  • 2.11e4
  • 2.13e4
  • 2.40e4
37.87
  • 37.87
  • 29.19
  • 28.77
  • 19.63
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.93e4
  • 1.93e4
35.45
  • 35.45
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
2.04e4
  • 2.04e4
31.79
  • 31.79
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.22e4
  • 2.22e4
25.56
  • 25.56
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata2 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000019772.

Cross-references

EnsemblENSDARG00000019772 (C2)
HGNCHGNC:1248 (C2)
ZFINZDB-GENE-110411-261 (si:ch1073-280e3.1)
EMBLCU469528, CU469536
Uniprot/SPTREMBLF1QJB3, F1QJB3_DANRE

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