D. rerio Gene: rps6 - ENSDARG00000019778 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000019778
Namerps6
Descriptionribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
OrganismDanio rerio (zebrafish)
Synonym(s)wu:fa92e06, wu:fb64g06, zgc:92237

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000031Pharyngula:Prim-25
38.3
  • 38.3
  • 77.7
  • 97.0
  • 99.6
  • 105
  • 143
  • 147
  • 148
  • 164
  • 231
99.87
  • 99.87
  • 99.74
  • 99.68
  • 99.67
  • 99.65
  • 99.52
  • 99.51
  • 99.51
  • 99.45
  • 99.23
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
40.0
  • 40.0
99.87
  • 99.87
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
58.0
  • 58.0
99.81
  • 99.81
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
72.0
  • 72.0
99.76
  • 99.76
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
78.6
  • 78.6
  • 143
  • 164
99.74
  • 99.74
  • 99.52
  • 99.46
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
80.0
  • 80.0
99.74
  • 99.74
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
84.0
  • 84.0
99.72
  • 99.72
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000017Gastrula:50%-epiboly
86.3
  • 86.3
  • 169
  • 279
  • 300
  • 337
  • 381
99.71
  • 99.71
  • 99.44
  • 99.07
  • 99.00
  • 98.87
  • 98.73
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
87.9
  • 87.9
99.71
  • 99.71
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
88.0
  • 88.0
99.71
  • 99.71
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
95.0
  • 95.0
99.69
  • 99.69
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
95.3
  • 95.3
  • 931
99.68
  • 99.68
  • 96.88
AEIR
  • AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
96.9
  • 96.9
99.68
  • 99.68
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
100
  • 100
99.67
  • 99.67
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
101
  • 101
99.66
  • 99.66
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
102
  • 102
  • 168
99.66
  • 99.66
  • 99.44
AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
104
  • 104
99.65
  • 99.65
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
120
  • 120
99.60
  • 99.60
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
123
  • 123
99.59
  • 99.59
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
126
  • 126
99.58
  • 99.58
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
135
  • 135
  • 1.51e3
99.55
  • 99.55
  • 94.95
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000037Larval:Day 5
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000036Larval:Day 4
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000106zygote stage
152
  • 152
  • 158
  • 172
  • 177
  • 191
  • 203
  • 206
  • 214
  • 217
  • 225
  • 230
  • 230
  • 429
  • 4.58e3
99.50
  • 99.50
  • 99.48
  • 99.43
  • 99.41
  • 99.36
  • 99.32
  • 99.31
  • 99.29
  • 99.28
  • 99.25
  • 99.23
  • 99.23
  • 98.57
  • 84.65
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
164
  • 164
99.45
  • 99.45
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
175
  • 175
  • 189
  • 397
  • 2.42e3
99.42
  • 99.42
  • 99.37
  • 98.68
  • 91.89
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
180
  • 180
99.40
  • 99.40
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
195
  • 195
  • 230
99.35
  • 99.35
  • 99.23
AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
227
  • 227
99.24
  • 99.24
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
359
  • 359
  • 924
  • 1.29e3
  • 1.99e3
  • 4.44e3
98.80
  • 98.80
  • 96.91
  • 95.70
  • 93.35
  • 85.13
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
726
  • 726
97.57
  • 97.57
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
834
  • 834
97.21
  • 97.21
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
5.59e3
  • 5.59e3
81.27
  • 81.27
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
5.83e3
  • 5.83e3
80.48
  • 80.48
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
7.17e3
  • 7.17e3
76.01
  • 76.01
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

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