D. rerio Gene: fn1a - ENSDARG00000019815 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000019815
Namefn1a
Descriptionfibronectin 1a [Source:ZFIN;Acc:ZDB-GENE-000426-1]
OrganismDanio rerio (zebrafish)
Synonym(s)fb80d10, fn, fn1, fn1l, fn2, nat, natter, wu:fb80d10

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.32e3
  • 1.32e3
95.55203
  • 95.55203
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000109gastrula stage
1.68e3
  • 1.68e3
  • 1.89e3
  • 3.49e3
  • 4.01e3
  • 1.09e4
94.32566
  • 94.32566
  • 93.61702
  • 88.22101
  • 86.43506
  • 63.18939
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.78e3
  • 1.78e3
94.00308
  • 94.00308
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
2.02e3
  • 2.02e3
93.16918
  • 93.16918
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • UBERON:0000068embryo stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
2.20e3
  • 2.20e3
  • 3.17e3
  • 3.55e3
  • 4.60e3
  • 5.28e3
  • 5.60e3
  • 6.05e3
  • 1.08e4
  • 1.10e4
  • 1.35e4
92.58216
  • 92.58216
  • 89.27311
  • 88.00128
  • 84.44666
  • 82.15830
  • 81.08259
  • 79.57159
  • 63.46719
  • 62.71675
  • 54.28976
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000036Larval:Day 4
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000106zygote stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000037Larval:Day 5
  • UBERON:0000104life cycle
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000016Blastula:30%-epiboly
  • UBERON:0000068embryo stage
  • UBERON:0000066fully formed stage
  • ZFS:0000049segmentation
2.46e3
  • 2.46e3
  • 2.58e3
  • 3.30e3
  • 3.69e3
  • 4.46e3
  • 5.19e3
  • 7.62e3
  • 7.70e3
  • 7.87e3
  • 8.54e3
  • 8.75e3
  • 8.87e3
  • 9.19e3
  • 9.96e3
  • 1.19e4
  • 1.22e4
  • 1.28e4
  • 1.45e4
  • 1.46e4
  • 1.48e4
91.70223
  • 91.70223
  • 91.28025
  • 88.85398
  • 87.53546
  • 84.94350
  • 82.44608
  • 74.24578
  • 73.96786
  • 73.40849
  • 71.12639
  • 70.43993
  • 70.02972
  • 68.95649
  • 66.34407
  • 59.73802
  • 58.80324
  • 56.64807
  • 51.00857
  • 50.68197
  • 49.94930
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
2.80e3
  • 2.80e3
  • 1.27e4
  • 1.32e4
90.55468
  • 90.55468
  • 57.13609
  • 55.53188
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
4.45e3
  • 4.45e3
  • 8.24e3
84.96837
  • 84.96837
  • 72.14725
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
4.71e3
  • 4.71e3
  • 5.78e3
  • 6.32e3
84.09822
  • 84.09822
  • 80.47062
  • 78.63853
AEIR
  • AEIR
  • AEIR
  • AEIR
ZFA:0005489endocardial precursor (Danio)
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
4.93e3
  • 4.93e3
  • 1.48e4
83.33503
  • 83.33503
  • 50.00169
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
5.15e3
  • 5.15e3
82.58824
  • 82.58824
AEIR
  • AEIR
UBERON:0003051ear vesicle
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000032Pharyngula:High-pec
5.38e3
  • 5.38e3
  • 5.92e3
  • 6.34e3
  • 8.14e3
  • 9.66e3
  • 9.87e3
  • 9.87e3
  • 1.01e4
81.80805
  • 81.80805
  • 79.98986
  • 78.56975
  • 72.48478
  • 67.36934
  • 66.64638
  • 66.63624
  • 65.77088
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
5.62e3
  • 5.62e3
  • 1.41e4
81.02175
  • 81.02175
  • 52.27658
AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
6.25e3
  • 6.25e3
78.87780
  • 78.87780
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
6.26e3
  • 6.26e3
78.84090
  • 78.84090
AEIR
  • AEIR
UBERON:0005886post-hyoid pharyngeal arch skeleton
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
6.34e3
  • 6.34e3
  • 1.06e4
78.56975
  • 78.56975
  • 64.28063
AEIR
  • AEIR
  • AEIR
ZFA:0000092axis (Danio)
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
6.34e3
  • 6.34e3
  • 6.83e3
  • 6.83e3
78.56468
  • 78.56468
  • 76.91633
  • 76.91633
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002328notochord
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000027Segmentation:20-25 somites
6.66e3
  • 6.66e3
  • 7.40e3
  • 7.40e3
  • 1.01e4
  • 1.18e4
  • 1.30e4
  • 1.31e4
77.48818
  • 77.48818
  • 74.98477
  • 74.98477
  • 65.97465
  • 59.97634
  • 56.22973
  • 55.86038
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002533post-anal tail bud
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000025Segmentation:10-13 somites
6.73e3
  • 6.73e3
  • 9.35e3
  • 1.14e4
  • 1.15e4
  • 1.32e4
77.26767
  • 77.26767
  • 68.40414
  • 61.52495
  • 61.09084
  • 55.53188
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
6.74e3
  • 6.74e3
77.21934
  • 77.21934
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
7.01e3
  • 7.01e3
76.30676
  • 76.30676
AEIR
  • AEIR
UBERON:0005723floor plate spinal cord region
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000035Larval:Protruding-mouth
7.40e3
  • 7.40e3
  • 7.40e3
  • 7.40e3
75.00167
  • 75.00167
  • 75.00167
  • 75.00167
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2000084yolk
  • ZFS:0000027Segmentation:20-25 somites
7.40e3
  • 7.40e3
75.00167
  • 75.00167
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000029Pharyngula:Prim-5
7.40e3
  • 7.40e3
  • 7.40e3
  • 7.89e3
  • 7.89e3
  • 8.71e3
  • 8.71e3
  • 9.05e3
  • 1.07e4
74.99829
  • 74.99829
  • 74.98815
  • 73.32320
  • 73.32320
  • 70.57472
  • 70.57472
  • 69.42923
  • 63.87031
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
8.43e3
  • 8.43e3
  • 1.59e4
71.50399
  • 71.50399
  • 46.16804
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000035Larval:Protruding-mouth
8.72e3
  • 8.72e3
  • 1.08e4
70.54221
  • 70.54221
  • 63.43898
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
9.04e3
  • 9.04e3
69.44552
  • 69.44552
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
9.47e3
  • 9.47e3
68.00906
  • 68.00906
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
9.84e3
  • 9.84e3
66.72814
  • 66.72814
AEIR
  • AEIR
UBERON:0007097chordo neural hinge
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
9.86e3
  • 9.86e3
  • 9.86e3
  • 1.11e4
66.66328
  • 66.66328
  • 66.66328
  • 62.49323
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009881anterior lateral plate mesoderm
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
9.86e3
  • 9.86e3
  • 1.27e4
66.66328
  • 66.66328
  • 57.13609
AEIR
  • AEIR
  • AEIR
UBERON:0002539pharyngeal arch
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
1.02e4
  • 1.02e4
  • 1.04e4
  • 1.14e4
  • 1.20e4
65.60979
  • 65.60979
  • 64.68900
  • 61.52495
  • 59.35640
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.03e4
  • 1.03e4
65.33199
  • 65.33199
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
1.03e4
  • 1.03e4
  • 1.05e4
  • 1.07e4
65.28099
  • 65.28099
  • 64.64668
  • 63.74948
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2000083ventral mesoderm
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
1.09e4
  • 1.09e4
  • 1.27e4
63.31813
  • 63.31813
  • 57.13609
AEIR
  • AEIR
  • AEIR
UBERON:0006859swim bladder bud
  • ZFS:0000033Hatching:Long-pec
1.23e4
  • 1.23e4
58.32826
  • 58.32826
AEIR
  • AEIR
UBERON:2001073axial vasculature
  • ZFS:0000033Hatching:Long-pec
1.23e4
  • 1.23e4
58.32826
  • 58.32826
AEIR
  • AEIR
UBERON:0003079floor plate
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
1.25e4
  • 1.25e4
  • 1.36e4
  • 1.36e4
  • 1.48e4
57.67708
  • 57.67708
  • 54.15145
  • 54.15145
  • 49.98648
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003084heart primordium
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000026Segmentation:14-19 somites
1.29e4
  • 1.29e4
  • 1.39e4
56.24156
  • 56.24156
  • 52.91751
AEIR
  • AEIR
  • AEIR
UBERON:0000926mesoderm
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000023Segmentation:1-4 somites
1.37e4
  • 1.37e4
  • 1.38e4
53.82925
  • 53.82925
  • 53.31307
AEIR
  • AEIR
  • AEIR
UBERON:0004291heart rudiment
  • ZFS:0000027Segmentation:20-25 somites
1.40e4
  • 1.40e4
52.75244
  • 52.75244
AEIR
  • AEIR
UBERON:0001846internal ear
  • UBERON:0000068embryo stage
1.45e4
  • 1.45e4
50.83974
  • 50.83974
AEIR
  • AEIR
UBERON:0002518otolith organ
  • ZFS:0000037Larval:Day 5
1.48e4
  • 1.48e4
50.00169
  • 50.00169
AEIR
  • AEIR
UBERON:2000106extension
  • ZFS:0000027Segmentation:20-25 somites
1.48e4
  • 1.48e4
50.00169
  • 50.00169
AEIR
  • AEIR
UBERON:2000241midline column
  • ZFS:0000027Segmentation:20-25 somites
1.48e4
  • 1.48e4
50.00169
  • 50.00169
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.56e4
  • 1.56e4
47.14819
  • 47.14819
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

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