D. rerio Gene: ugdh - ENSDARG00000019838 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000019838
Nameugdh
DescriptionUDP-glucose 6-dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-011022-1]
OrganismDanio rerio (zebrafish)
Synonym(s)ik:tdsubc_2a8, jek, jekyll, tdsubc_2a8, xx:tdsubc_2a8
Orthologs(s)25 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.67e3
  • 1.67e3
94.42
  • 94.42
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.97e3
  • 1.97e3
93.41
  • 93.41
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.97e3
  • 1.97e3
93.41
  • 93.41
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000109gastrula stage
2.16e3
  • 2.16e3
  • 4.16e3
  • 4.94e3
  • 5.92e3
  • 5.94e3
  • 7.20e3
92.78
  • 92.78
  • 86.07
  • 83.47
  • 80.17
  • 80.12
  • 75.91
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
2.55e3
  • 2.55e3
91.46
  • 91.46
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000016Blastula:30%-epiboly
2.99e3
  • 2.99e3
  • 3.15e3
  • 4.24e3
  • 4.54e3
  • 5.93e3
90.00
  • 90.00
  • 89.46
  • 85.80
  • 84.80
  • 80.15
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
3.25e3
  • 3.25e3
  • 3.31e3
  • 3.43e3
  • 5.40e3
  • 5.98e3
  • 5.98e3
  • 6.24e3
  • 7.80e3
  • 9.29e3
  • 9.78e3
89.13
  • 89.13
  • 88.92
  • 88.52
  • 81.93
  • 79.99
  • 79.98
  • 79.12
  • 73.89
  • 68.90
  • 67.25
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
3.71e3
  • 3.71e3
87.59
  • 87.59
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
4.68e3
  • 4.68e3
  • 1.26e4
84.34
  • 84.34
  • 57.80
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
4.84e3
  • 4.84e3
83.79
  • 83.79
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
4.99e3
  • 4.99e3
83.28
  • 83.28
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
5.02e3
  • 5.02e3
83.20
  • 83.20
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000106zygote stage
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000036Larval:Day 4
  • UBERON:00072334 cell stage
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000037Larval:Day 5
5.51e3
  • 5.51e3
  • 6.34e3
  • 6.43e3
  • 6.67e3
  • 6.71e3
  • 6.79e3
  • 7.01e3
  • 7.14e3
  • 7.30e3
  • 7.43e3
  • 7.45e3
  • 7.45e3
  • 7.60e3
  • 8.62e3
  • 9.96e3
  • 9.96e3
  • 1.29e4
81.54
  • 81.54
  • 78.76
  • 78.46
  • 77.66
  • 77.53
  • 77.27
  • 76.53
  • 76.09
  • 75.55
  • 75.11
  • 75.07
  • 75.06
  • 74.56
  • 71.15
  • 66.66
  • 66.65
  • 56.91
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
5.84e3
  • 5.84e3
  • 5.92e3
  • 6.41e3
80.44
  • 80.44
  • 80.18
  • 78.52
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
6.33e3
  • 6.33e3
78.79
  • 78.79
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
6.48e3
  • 6.48e3
78.31
  • 78.31
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
6.55e3
  • 6.55e3
78.09
  • 78.09
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
7.07e3
  • 7.07e3
76.32
  • 76.32
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
7.12e3
  • 7.12e3
76.17
  • 76.17
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
7.42e3
  • 7.42e3
  • 8.79e3
75.15
  • 75.15
  • 70.58
AEIR
  • AEIR
  • AEIR
UBERON:0002531paired fin bud
  • ZFS:0000033Hatching:Long-pec
7.47e3
  • 7.47e3
75.00
  • 75.00
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
7.53e3
  • 7.53e3
74.80
  • 74.80
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
7.64e3
  • 7.64e3
74.44
  • 74.44
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
7.75e3
  • 7.75e3
74.07
  • 74.07
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
7.92e3
  • 7.92e3
73.49
  • 73.49
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
8.22e3
  • 8.22e3
72.46
  • 72.46
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
8.54e3
  • 8.54e3
  • 1.27e4
71.41
  • 71.41
  • 57.45
AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
9.00e3
  • 9.00e3
  • 1.21e4
69.86
  • 69.86
  • 59.36
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
9.55e3
  • 9.55e3
  • 1.04e4
  • 1.09e4
68.02
  • 68.02
  • 65.31
  • 63.53
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.09e4
  • 1.09e4
63.44
  • 63.44
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.11e4
  • 1.11e4
62.94
  • 62.94
AEIR
  • AEIR
UBERON:0001846internal ear
  • ZFS:0000037Larval:Day 5
1.12e4
  • 1.12e4
62.50
  • 62.50
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.15e4
  • 1.15e4
61.63
  • 61.63
AEIR
  • AEIR
UBERON:0001840semicircular canal
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000033Hatching:Long-pec
1.19e4
  • 1.19e4
  • 1.49e4
60.00
  • 60.00
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:0003051ear vesicle
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
1.20e4
  • 1.20e4
  • 1.27e4
59.98
  • 59.98
  • 57.47
AEIR
  • AEIR
  • AEIR
UBERON:0000151pectoral fin
  • ZFS:0000033Hatching:Long-pec
1.21e4
  • 1.21e4
59.36
  • 59.36
AEIR
  • AEIR
ZFA:0000003adaxial cell (Danio)
  • ZFS:0000024Segmentation:5-9 somites
1.33e4
  • 1.33e4
55.53
  • 55.53
AEIR
  • AEIR
UBERON:2000058polster
  • ZFS:0000024Segmentation:5-9 somites
1.34e4
  • 1.34e4
54.97
  • 54.97
AEIR
  • AEIR
UBERON:0002539pharyngeal arch
  • ZFS:0000033Hatching:Long-pec
1.40e4
  • 1.40e4
53.10
  • 53.10
AEIR
  • AEIR
UBERON:0004141heart tube
  • ZFS:0000031Pharyngula:Prim-25
1.41e4
  • 1.41e4
52.75
  • 52.75
AEIR
  • AEIR
UBERON:0008896post-hyoid pharyngeal arch
  • ZFS:0000030Pharyngula:Prim-15
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0002241chondrocranium
  • ZFS:0000033Hatching:Long-pec
1.49e4
  • 1.49e4
49.99
  • 49.99
AEIR
  • AEIR
UBERON:0001708jaw skeleton
  • ZFS:0000033Hatching:Long-pec
1.49e4
  • 1.49e4
49.99
  • 49.99
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi18 species18 genesCompare expression
Bilateria25 species25 genesCompare expression

Orthology information comes from OMA : ENSDARG00000019838.

Cross-references

EnsemblENSDARG00000019838 (ugdh)
ZFINZDB-GENE-011022-1 (ugdh)
EMBLBC154794, CR759875
Uniprot/SPTREMBLA8WGP7, A8WGP7_DANRE

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