D. rerio Gene: atp1a1b - ENSDARG00000019856 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000019856
Nameatp1a1b
DescriptionATPase, Na+/K+ transporting, alpha 1b polypeptide [Source:ZFIN;Acc:ZDB-GENE-001212-5]
OrganismDanio rerio (zebrafish)
Synonym(s)atp1a1l5, atp[a]1b2, cb707, wu:fj34g01, zgc:92351

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000104life cycle
616
  • 616
  • 7.27e3
  • 1.40e4
97.92059
  • 97.92059
  • 75.42735
  • 52.72371
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
927
  • 927
  • 1.04e3
96.86950
  • 96.86950
  • 96.48150
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
975
  • 975
  • 2.01e3
  • 4.70e3
  • 4.87e3
  • 5.55e3
  • 6.57e3
  • 1.21e4
  • 1.38e4
  • 1.39e4
  • 1.40e4
96.70674
  • 96.70674
  • 93.19817
  • 84.13466
  • 83.54182
  • 81.23806
  • 77.79265
  • 58.99471
  • 53.25196
  • 52.92887
  • 52.65165
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.01e3
  • 1.01e3
96.59789
  • 96.59789
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
1.04e3
  • 1.04e3
  • 1.41e3
  • 1.73e3
96.49607
  • 96.49607
  • 95.24875
  • 94.15078
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
1.21e3
  • 1.21e3
  • 1.77e3
  • 2.79e3
  • 3.64e3
  • 5.35e3
  • 7.90e3
  • 9.03e3
  • 1.14e4
  • 1.17e4
  • 1.18e4
  • 1.20e4
  • 1.27e4
  • 1.45e4
  • 1.46e4
  • 1.47e4
95.90521
  • 95.90521
  • 94.00509
  • 90.57959
  • 87.70278
  • 81.91432
  • 73.29939
  • 69.49535
  • 61.59298
  • 60.49691
  • 60.13015
  • 59.60022
  • 57.11711
  • 50.89926
  • 50.68197
  • 50.19874
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
2.44e3
  • 2.44e3
  • 7.05e3
91.74199
  • 91.74199
  • 76.18841
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
3.94e3
  • 3.94e3
86.68988
  • 86.68988
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
4.58e3
  • 4.58e3
84.53403
  • 84.53403
AEIR
  • AEIR
UBERON:0001893telencephalon
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
7.01e3
  • 7.01e3
  • 7.40e3
  • 8.02e3
  • 1.09e4
  • 1.09e4
76.30396
  • 76.30396
  • 74.98815
  • 72.89808
  • 63.13761
  • 63.13761
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003079floor plate
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
7.40e3
  • 7.40e3
  • 7.40e3
  • 7.97e3
  • 7.97e3
  • 8.63e3
74.99322
  • 74.99322
  • 74.98984
  • 73.06846
  • 73.06846
  • 70.82487
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
7.43e3
  • 7.43e3
  • 8.62e3
  • 9.35e3
74.89194
  • 74.89194
  • 70.85158
  • 68.40555
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
7.73e3
  • 7.73e3
73.86984
  • 73.86984
AEIR
  • AEIR
UBERON:0002028hindbrain
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
7.75e3
  • 7.75e3
  • 8.14e3
  • 8.99e3
  • 9.62e3
  • 1.01e4
  • 1.03e4
  • 1.04e4
73.79430
  • 73.79430
  • 72.48478
  • 69.61749
  • 67.48142
  • 65.77088
  • 65.19372
  • 64.97970
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
8.14e3
  • 8.14e3
  • 8.14e3
  • 8.46e3
  • 1.01e4
  • 1.08e4
72.48478
  • 72.48478
  • 72.48478
  • 71.40490
  • 65.88711
  • 63.61269
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001894diencephalon
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
8.37e3
  • 8.37e3
  • 8.57e3
  • 8.64e3
  • 1.03e4
  • 1.08e4
71.72055
  • 71.72055
  • 71.03743
  • 70.81304
  • 65.19372
  • 63.61269
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
9.92e3
  • 9.92e3
66.46443
  • 66.46443
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.00e4
  • 1.00e4
66.11397
  • 66.11397
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.09e4
  • 1.09e4
63.18750
  • 63.18750
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.11e4
  • 1.11e4
62.34723
  • 62.34723
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
1.13e4
  • 1.13e4
  • 1.23e4
  • 1.23e4
  • 1.23e4
  • 1.26e4
  • 1.38e4
61.88109
  • 61.88109
  • 58.31136
  • 58.31136
  • 58.31136
  • 57.47466
  • 53.31307
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.21e4
  • 1.21e4
58.99819
  • 58.99819
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
1.23e4
  • 1.23e4
58.41129
  • 58.41129
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.25e4
  • 1.25e4
57.59890
  • 57.59890
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.35e4
  • 1.35e4
54.31859
  • 54.31859
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.56e4
  • 1.56e4
47.44563
  • 47.44563
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.58e4
  • 1.58e4
46.57361
  • 46.57361
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
1.62e4
  • 1.62e4
  • 1.67e4
  • 1.71e4
  • 1.74e4
45.32304
  • 45.32304
  • 43.45306
  • 42.20601
  • 41.29630
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLAL807829
EnsemblENSDARG00000019856 (atp1a1b)
Uniprot/SPTREMBLB0R068, B0R068_DANRE
ZFINZDB-GENE-001212-5 (atp1a1b)

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