D. rerio Gene: atp1a1b - ENSDARG00000019856 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000019856
Nameatp1a1b
DescriptionATPase, Na+/K+ transporting, alpha 1b polypeptide [Source:ZFIN;Acc:ZDB-GENE-001212-5]
OrganismDanio rerio (zebrafish)
Synonym(s)atp1a1l5, atp[a]1b2, cb707, wu:fj34g01, zgc:92351

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000104life cycle
448
  • 448
  • 7.32e3
  • 1.41e4
98.50316
  • 98.50316
  • 75.48049
  • 52.72421
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
927
  • 927
  • 1.04e3
96.89817
  • 96.89817
  • 96.51408
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
975
  • 975
  • 2.02e3
  • 4.70e3
  • 4.91e3
  • 5.87e3
  • 6.58e3
  • 1.22e4
  • 1.39e4
  • 1.40e4
  • 1.41e4
96.73727
  • 96.73727
  • 93.24790
  • 84.28155
  • 83.57740
  • 80.35482
  • 77.96149
  • 59.08338
  • 53.35308
  • 53.03071
  • 52.75408
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.01e3
  • 1.01e3
96.62897
  • 96.62897
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
1.18e3
  • 1.18e3
  • 1.42e3
  • 2.38e3
96.04557
  • 96.04557
  • 95.25902
  • 92.03821
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
1.22e3
  • 1.22e3
  • 1.79e3
  • 2.81e3
  • 3.67e3
  • 5.39e3
  • 7.96e3
  • 9.09e3
  • 1.14e4
  • 1.18e4
  • 1.19e4
  • 1.20e4
  • 1.28e4
  • 1.35e4
  • 1.47e4
  • 1.47e4
  • 1.49e4
95.91371
  • 95.91371
  • 94.01805
  • 90.59994
  • 87.72936
  • 81.95342
  • 73.35713
  • 69.56133
  • 61.67602
  • 60.58233
  • 60.21639
  • 59.68761
  • 57.20986
  • 54.84215
  • 50.90001
  • 50.68372
  • 50.20065
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
2.46e3
  • 2.46e3
  • 7.10e3
91.75987
  • 91.75987
  • 76.23990
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
3.28e3
  • 3.28e3
  • 7.48e3
  • 8.69e3
  • 9.42e3
89.00904
  • 89.00904
  • 74.94622
  • 70.91461
  • 68.47390
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
3.94e3
  • 3.94e3
86.81311
  • 86.81311
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
4.48e3
  • 4.48e3
84.98858
  • 84.98858
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
5.76e3
  • 5.76e3
80.70706
  • 80.70706
AEIR
  • AEIR
UBERON:0001893telencephalon
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
7.08e3
  • 7.08e3
  • 7.47e3
  • 8.09e3
  • 1.10e4
  • 1.10e4
76.30406
  • 76.30406
  • 74.98828
  • 72.89824
  • 63.13780
  • 63.13780
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003079floor plate
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
7.47e3
  • 7.47e3
  • 7.47e3
  • 8.04e3
  • 8.04e3
  • 8.71e3
74.99330
  • 74.99330
  • 74.98995
  • 73.06855
  • 73.06855
  • 70.82497
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
7.73e3
  • 7.73e3
74.11178
  • 74.11178
AEIR
  • AEIR
UBERON:0002028hindbrain
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
7.83e3
  • 7.83e3
  • 8.22e3
  • 9.07e3
  • 9.71e3
  • 1.02e4
  • 1.04e4
  • 1.05e4
73.79446
  • 73.79446
  • 72.48491
  • 69.61775
  • 67.48157
  • 65.77105
  • 65.19395
  • 64.97991
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
8.22e3
  • 8.22e3
  • 8.22e3
  • 8.54e3
  • 1.02e4
  • 1.09e4
72.48491
  • 72.48491
  • 72.48491
  • 71.40512
  • 65.88732
  • 63.61293
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001894diencephalon
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
8.45e3
  • 8.45e3
  • 8.65e3
  • 8.72e3
  • 1.04e4
  • 1.09e4
71.72072
  • 71.72072
  • 71.03757
  • 70.81325
  • 65.19395
  • 63.61293
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
9.75e3
  • 9.75e3
  • 1.34e4
67.34698
  • 67.34698
  • 55.22359
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
9.92e3
  • 9.92e3
66.77494
  • 66.77494
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.01e4
  • 1.01e4
66.18726
  • 66.18726
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.10e4
  • 1.10e4
63.26712
  • 63.26712
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.12e4
  • 1.12e4
62.42866
  • 62.42866
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
1.14e4
  • 1.14e4
  • 1.20e4
  • 1.25e4
  • 1.25e4
  • 1.25e4
  • 1.27e4
  • 1.39e4
61.88132
  • 61.88132
  • 59.97656
  • 58.31156
  • 58.31156
  • 58.31156
  • 57.47487
  • 53.31323
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
1.15e4
  • 1.15e4
  • 1.66e4
  • 1.69e4
  • 1.72e4
  • 1.75e4
61.57600
  • 61.57600
  • 44.34287
  • 43.57536
  • 42.33101
  • 41.42327
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.21e4
  • 1.21e4
59.37783
  • 59.37783
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.28e4
  • 1.28e4
57.12742
  • 57.12742
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.35e4
  • 1.35e4
54.72069
  • 54.72069
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.36e4
  • 1.36e4
54.41737
  • 54.41737
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.56e4
  • 1.56e4
47.93222
  • 47.93222
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.58e4
  • 1.58e4
47.07273
  • 47.07273
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.58e4
  • 1.58e4
47.06828
  • 47.06828
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.59e4
  • 1.59e4
46.84215
  • 46.84215
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.68e4
  • 1.68e4
43.71296
  • 43.71296
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLAL807829
EnsemblENSDARG00000019856 (atp1a1b)
Uniprot/SPTREMBLB0R068, B0R068_DANRE
ZFINZDB-GENE-001212-5 (atp1a1b)

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