D. rerio Gene: rcvrn2 - ENSDARG00000019902 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000019902
Namercvrn2
Descriptionrecoverin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7590]
OrganismDanio rerio (zebrafish)
Synonym(s)fk53a03, rcv1, rcv2a, wu:fk53a03, zgc:73121
Orthologs(s)2 orthologs
Paralog(s)49 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
86.1
  • 86.1
  • 115
  • 2.40e3
  • 1.20e4
  • 1.26e4
  • 1.30e4
99.71
  • 99.71
  • 99.62
  • 91.95
  • 59.98
  • 57.85
  • 56.49
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000024Segmentation:5-9 somites
  • UBERON:0000068embryo stage
574
  • 574
  • 5.54e3
  • 1.34e4
  • 1.35e4
  • 1.41e4
  • 1.42e4
  • 1.55e4
  • 1.67e4
  • 1.75e4
  • 1.80e4
98.08
  • 98.08
  • 81.44
  • 54.98
  • 54.68
  • 52.82
  • 52.59
  • 48.25
  • 44.22
  • 41.29
  • 39.78
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.17e3
  • 1.17e3
  • 1.34e3
  • 7.23e3
96.10
  • 96.10
  • 95.52
  • 75.79
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000024Segmentation:5-9 somites
1.61e3
  • 1.61e3
  • 4.03e3
  • 4.19e3
  • 6.72e3
  • 1.03e4
  • 1.40e4
  • 1.58e4
  • 1.61e4
  • 1.62e4
  • 1.68e4
94.62
  • 94.62
  • 86.52
  • 85.98
  • 77.51
  • 65.61
  • 53.22
  • 47.01
  • 46.12
  • 45.71
  • 43.69
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001787photoreceptor layer of retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
5.60e3
  • 5.60e3
  • 8.96e3
  • 9.33e3
  • 1.49e4
  • 1.49e4
81.25
  • 81.25
  • 69.99
  • 68.74
  • 49.99
  • 49.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
6.58e3
  • 6.58e3
77.97
  • 77.97
AEIR
  • AEIR
UBERON:0001905pineal body
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000031Pharyngula:Prim-25
9.33e3
  • 9.33e3
  • 1.10e4
  • 1.20e4
  • 1.21e4
  • 1.35e4
  • 1.39e4
  • 1.40e4
  • 1.41e4
68.74
  • 68.74
  • 63.14
  • 59.98
  • 59.36
  • 54.73
  • 53.31
  • 53.10
  • 52.75
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
1.00e4
  • 1.00e4
  • 1.84e4
66.42
  • 66.42
  • 38.26
AEIR
  • AEIR
  • AEIR
UBERON:0001789outer nuclear layer of retina
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
1.24e4
  • 1.24e4
  • 1.49e4
58.33
  • 58.33
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.56e4
  • 1.56e4
47.72
  • 47.72
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.58e4
  • 1.58e4
47.11
  • 47.11
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.66e4
  • 1.66e4
44.26
  • 44.26
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi2 species2 genesCompare expression

Orthology information comes from OMA : ENSDARG00000019902.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Euteleostomi1 geneCompare expression
Bilateria3 genesCompare expression
Eukaryota49 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000019902.

Cross-references

EnsemblENSDARG00000019902 (rcvrn2)
ZFINZDB-GENE-030131-7590 (rcvrn2)
EMBLBC059485, CU459065, KT325592
Uniprot/SPTREMBLQ6PC38, Q6PC38_DANRE

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