Gene: epb41l3b - ENSDARG00000019917 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000019917
Name	epb41l3b
Description	erythrocyte membrane protein band 4.1-like 3b [Source:ZFIN;Acc:ZDB-GENE-021106-1]
Organism	Danio rerio (zebrafish)
Synonym(s)	cb455, epb4.1l3, prcb4.1, zgc:85963

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0000160	intestine	[+] 1 stage UBERON:0000066fully formed stage	573 573	98.06669 98.06669	AEIR AEIR
UBERON:0002106	spleen	[+] 1 stage UBERON:0000066fully formed stage	1.65e3 1.65e3	94.44003 94.44003	AEIR AEIR
UBERON:0007132	head kidney	[+] 1 stage UBERON:0000066fully formed stage	1.69e3 1.69e3	94.29470 94.29470	AEIR AEIR
UBERON:0000922	embryo	[+] 5 stages ZFS:0000033Hatching:Long-pec ZFS:0000029Pharyngula:Prim-5 ZFS:0000037Larval:Day 5 UBERON:0000068embryo stage UBERON:0004707pharyngula stage	1.98e3 1.98e3 2.06e3 2.16e3 2.21e3 3.02e3	93.32084 93.32084 93.03878 92.69633 92.53376 89.78926	AEIR AEIR AEIR AEIR AEIR AEIR
UBERON:0000473	testis	[+] 1 stage UBERON:0000066fully formed stage	2.26e3 2.26e3	92.36655 92.36655	AEIR AEIR
UBERON:0002385	muscle tissue	[+] 1 stage UBERON:0000066fully formed stage	2.75e3 2.75e3	90.70860 90.70860	AEIR AEIR
UBERON:0000948	heart	[+] 1 stage UBERON:0000066fully formed stage	3.04e3 3.04e3	89.73617 89.73617	AEIR AEIR
UBERON:0002481	bone tissue	[+] 1 stage UBERON:0000066fully formed stage	3.09e3 3.09e3	89.57633 89.57633	AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0000066fully formed stage	3.48e3 3.48e3	88.23325 88.23325	AEIR AEIR
UBERON:0003982	mature ovarian follicle	[+] 1 stage UBERON:0000066fully formed stage	3.66e3 3.66e3	87.64301 87.64301	AEIR AEIR
UBERON:0000206	pharyngeal gill	[+] 1 stage UBERON:0000066fully formed stage	3.71e3 3.71e3	87.46388 87.46388	AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	4.18e3 4.18e3	85.88180 85.88180	AEIR AEIR
UBERON:0000955	brain	[+] 1 stage UBERON:0000066fully formed stage	4.41e3 4.41e3	85.11110 85.11110	AEIR AEIR
UBERON:0000033	head	[+] 2 stages ZFS:0000037Larval:Day 5 UBERON:0000066fully formed stage	4.43e3 4.43e3 6.74e3	85.04310 85.04310 77.23286	AEIR AEIR AEIR
UBERON:0002415	tail	[+] 1 stage UBERON:0000066fully formed stage	5.08e3 5.08e3	82.83339 82.83339	AEIR AEIR
UBERON:0000970	eye	[+] 1 stage ZFS:0000031Pharyngula:Prim-25	1.13e4 1.13e4	61.78862 61.78862	AEIR AEIR
UBERON:0000966	retina	[+] 2 stages ZFS:0000033Hatching:Long-pec ZFS:0000032Pharyngula:High-pec	1.14e4 1.14e4 1.18e4	61.33828 61.33828 59.97634	AEIR AEIR AEIR
UBERON:0001787	photoreceptor layer of retina	[+] 1 stage ZFS:0000033Hatching:Long-pec	1.18e4 1.18e4	59.98986 59.98986	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

In situ hybridization data: ZFIN
RNA-Seq data: Bgee

Sources of raw data:

In situ hybridization data: ZFIN
RNA-Seq data: GEO

Cross-references

EMBL	CABZ01071924, CABZ01071925, CABZ01071926, CABZ01071927, CABZ01071928, CABZ01071929, CABZ01071930, CABZ01071931, CABZ01071932, CABZ01082505
Ensembl	ENSDARG00000019917 (epb41l3b)
Uniprot/SPTREMBL	A0A0H2UKP3, A0A0H2UKP3_DANRE, A0A0H2UKX1, A0A0H2UKX1_DANRE, F1Q8U6, F1Q8U6_DANRE
ZFIN	ZDB-GENE-021106-1 (epb41l3b)