D. rerio Gene: carf - ENSDARG00000019950 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000019950
Namecarf
Descriptioncalcium responsive transcription factor [Source:ZFIN;Acc:ZDB-GENE-070912-172]
OrganismDanio rerio (zebrafish)
Synonym(s)als2cr8, si:ch211-195c14.1

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreSources
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
3.51e3
  • 3.51e3
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
3.60e3
  • 3.60e3
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
4.09e3
  • 4.09e3
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
4.16e3
  • 4.16e3
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
4.34e3
  • 4.34e3
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
4.46e3
  • 4.46e3
  • 4.97e3
  • 6.22e3
  • 8.18e3
  • 8.73e3
  • 9.79e3
  • 9.91e3
  • 1.02e4
  • 1.10e4
  • 1.15e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
5.29e3
  • 5.29e3
  • 6.92e3
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
6.43e3
  • 6.43e3
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
6.80e3
  • 6.80e3
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
6.92e3
  • 6.92e3
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
7.04e3
  • 7.04e3
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
7.33e3
  • 7.33e3
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000037Larval:Day 5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000036Larval:Day 4
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000040Larval:Days 14-20
  • UBERON:0000106zygote stage
7.65e3
  • 7.65e3
  • 8.18e3
  • 8.34e3
  • 8.38e3
  • 8.77e3
  • 8.83e3
  • 8.88e3
  • 8.90e3
  • 9.07e3
  • 9.13e3
  • 9.13e3
  • 9.22e3
  • 9.80e3
  • 1.02e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
7.94e3
  • 7.94e3
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
8.14e3
  • 8.14e3
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
8.24e3
  • 8.24e3
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
8.25e3
  • 8.25e3
  • 8.61e3
  • 8.92e3
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
9.08e3
  • 9.08e3
  • 1.08e4
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
9.24e3
  • 9.24e3
AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
9.37e3
  • 9.37e3
  • 9.52e3
  • 9.78e3
  • 9.92e3
  • 1.00e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
9.67e3
  • 9.67e3
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.01e4
  • 1.01e4
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.03e4
  • 1.03e4
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.03e4
  • 1.03e4
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.07e4
  • 1.07e4
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
1.09e4
  • 1.09e4
  • 1.16e4
  • 1.16e4
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
1.10e4
  • 1.10e4
  • 1.12e4
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
1.27e4
  • 1.27e4
  • 1.27e4
  • 1.35e4
AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation
Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.
Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

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