D. rerio Gene: usp2a - ENSDARG00000020107 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000020107
Nameusp2a
Descriptionubiquitin specific peptidase 2a [Source:ZFIN;Acc:ZDB-GENE-041212-59]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:92134
Orthologs(s)12 orthologs
Paralog(s)10 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
340
  • 340
98.87
  • 98.87
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
438
  • 438
  • 823
98.54
  • 98.54
  • 97.25
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
487
  • 487
98.37
  • 98.37
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
513
  • 513
98.28
  • 98.28
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
805
  • 805
97.31
  • 97.31
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
1.07e3
  • 1.07e3
96.42
  • 96.42
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
1.09e3
  • 1.09e3
  • 1.97e3
  • 2.66e3
  • 3.85e3
  • 4.16e3
  • 6.53e3
  • 1.03e4
  • 1.26e4
  • 1.27e4
  • 1.37e4
96.35
  • 96.35
  • 93.41
  • 91.08
  • 87.10
  • 86.06
  • 78.13
  • 65.56
  • 57.96
  • 57.33
  • 54.13
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.29e3
  • 1.29e3
  • 2.19e3
95.69
  • 95.69
  • 92.67
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.38e3
  • 1.38e3
95.37
  • 95.37
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
1.58e3
  • 1.58e3
  • 1.08e4
  • 1.10e4
94.71
  • 94.71
  • 63.95
  • 63.24
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.64e3
  • 1.64e3
94.51
  • 94.51
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
1.83e3
  • 1.83e3
  • 4.09e3
  • 4.21e3
93.88
  • 93.88
  • 86.31
  • 85.90
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
2.23e3
  • 2.23e3
92.55
  • 92.55
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.39e3
  • 2.39e3
91.99
  • 91.99
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
2.55e3
  • 2.55e3
  • 1.29e4
91.47
  • 91.47
  • 56.93
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000026Segmentation:14-19 somites
  • UBERON:0000106zygote stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
5.32e3
  • 5.32e3
  • 5.45e3
  • 5.94e3
  • 7.02e3
  • 8.01e3
  • 9.14e3
  • 9.72e3
  • 1.26e4
  • 1.31e4
  • 1.77e4
  • 1.78e4
  • 1.78e4
82.19
  • 82.19
  • 81.75
  • 80.11
  • 76.49
  • 73.19
  • 69.38
  • 67.45
  • 57.71
  • 56.26
  • 40.62
  • 40.56
  • 40.38
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
5.56e3
  • 5.56e3
81.38
  • 81.38
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
8.10e3
  • 8.10e3
72.87
  • 72.87
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
8.44e3
  • 8.44e3
71.74
  • 71.74
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
9.05e3
  • 9.05e3
69.71
  • 69.71
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.01e4
  • 1.01e4
66.14
  • 66.14
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
65.31
  • 65.31
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
  • 1.07e4
65.24
  • 65.24
  • 64.16
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.05e4
  • 1.05e4
  • 1.22e4
64.77
  • 64.77
  • 59.05
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.09e4
  • 1.09e4
63.61
  • 63.61
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.14e4
  • 1.14e4
61.80
  • 61.80
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.19e4
  • 1.19e4
59.99
  • 59.99
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.23e4
  • 1.23e4
58.94
  • 58.94
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.23e4
  • 1.23e4
58.73
  • 58.73
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.24e4
  • 1.24e4
58.39
  • 58.39
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
1.27e4
  • 1.27e4
  • 1.32e4
  • 1.75e4
57.59
  • 57.59
  • 55.75
  • 41.42
AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Paralogs (same species)

Cross-references

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