D. rerio Gene: efnb2a - ENSDARG00000020164 - Danio rerio (zebrafish)

Gene Information

Ensembl IDENSDARG00000020164
Nameefnb2a
Descriptionephrin-B2a [Source:ZFIN;Acc:ZDB-GENE-990415-67]
OrganismDanio rerio (zebrafish)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreSources
UBERON:0005805dorsal aorta
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000034Hatching:Pec-fin
1.06e3
  • 1.06e3
  • 3.70e3
  • 3.70e3
  • 7.40e3
  • 8.46e3
  • 1.48e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.83e3
  • 1.83e3
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
2.65e3
  • 2.65e3
  • 5.34e3
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
2.91e3
  • 2.91e3
  • 3.66e3
  • 3.78e3
  • 5.50e3
  • 5.82e3
  • 8.17e3
  • 8.22e3
  • 8.96e3
  • 1.53e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005426lens vesicle
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
3.70e3
  • 3.70e3
  • 5.22e3
  • 5.55e3
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
3.97e3
  • 3.97e3
AEIR
  • AEIR
UBERON:0002539pharyngeal arch
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
4.23e3
  • 4.23e3
  • 4.23e3
  • 5.76e3
  • 7.40e3
  • 7.97e3
  • 8.33e3
  • 8.71e3
  • 9.25e3
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009614hindbrain neural plate
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
4.55e3
  • 4.55e3
  • 4.55e3
  • 5.29e3
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
5.21e3
  • 5.21e3
  • 1.14e4
  • 1.35e4
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003071eye primordium
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
5.29e3
  • 5.29e3
  • 6.83e3
  • 6.83e3
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004128optic vesicle
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
5.29e3
  • 5.29e3
  • 6.09e3
  • 6.09e3
  • 6.09e3
  • 6.48e3
  • 6.83e3
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001893telencephalon
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
5.45e3
  • 5.45e3
  • 5.45e3
  • 5.76e3
  • 6.79e3
  • 7.40e3
  • 9.05e3
  • 9.25e3
  • 9.35e3
  • 9.35e3
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001891midbrain
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000037Larval:Day 5
5.55e3
  • 5.55e3
  • 5.76e3
  • 7.40e3
  • 7.40e3
  • 7.84e3
  • 8.88e3
  • 9.51e3
  • 1.11e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
5.59e3
  • 5.59e3
AEIR
  • AEIR
UBERON:0005511rhombomere 4
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000027Segmentation:20-25 somites
5.92e3
  • 5.92e3
  • 1.23e4
AEIR
  • AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000030Pharyngula:Prim-15
5.92e3
  • 5.92e3
  • 6.58e3
  • 6.97e3
  • 7.89e3
  • 7.89e3
  • 8.22e3
  • 8.46e3
  • 8.71e3
  • 8.88e3
  • 8.88e3
  • 8.88e3
  • 9.05e3
  • 9.87e3
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
5.92e3
  • 5.92e3
  • 5.92e3
  • 6.79e3
  • 7.40e3
  • 7.40e3
  • 1.17e4
  • 1.18e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000040Larval:Days 14-20
5.96e3
  • 5.96e3
  • 7.68e3
  • 7.88e3
  • 8.18e3
  • 8.25e3
  • 8.27e3
  • 8.51e3
  • 9.31e3
  • 9.90e3
  • 1.01e4
  • 1.06e4
  • 1.08e4
  • 1.20e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
6.44e3
  • 6.44e3
  • 8.88e3
  • 9.11e3
  • 1.73e4
  • 1.76e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
6.77e3
  • 6.77e3
AEIR
  • AEIR
UBERON:2005044optic artery
  • ZFS:0000031Pharyngula:Prim-25
7.40e3
  • 7.40e3
AEIR
  • AEIR
UBERON:0005499rhombomere 1
  • ZFS:0000025Segmentation:10-13 somites
7.40e3
  • 7.40e3
AEIR
  • AEIR
UBERON:0007294presumptive rhombomere 7
  • ZFS:0000024Segmentation:5-9 somites
7.40e3
  • 7.40e3
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
8.34e3
  • 8.34e3
AEIR
  • AEIR
UBERON:0007291presumptive rhombomere 4
  • ZFS:0000024Segmentation:5-9 somites
8.88e3
  • 8.88e3
AEIR
  • AEIR
UBERON:0003072optic cup
  • ZFS:0000029Pharyngula:Prim-5
8.88e3
  • 8.88e3
AEIR
  • AEIR
UBERON:0014907intersomitic vessel
  • ZFS:0000029Pharyngula:Prim-5
8.88e3
  • 8.88e3
AEIR
  • AEIR
UBERON:0002028hindbrain
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000037Larval:Day 5
8.88e3
  • 8.88e3
  • 9.01e3
  • 9.62e3
  • 1.01e4
  • 1.04e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002541germ ring
  • ZFS:0000019Gastrula:Shield
9.25e3
  • 9.25e3
AEIR
  • AEIR
UBERON:0005523rhombomere 7
  • ZFS:0000025Segmentation:10-13 somites
9.86e3
  • 9.86e3
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.07e4
  • 1.07e4
AEIR
  • AEIR
UBERON:0003062primitive knot
  • ZFS:0000019Gastrula:Shield
1.08e4
  • 1.08e4
AEIR
  • AEIR
UBERON:0004879marginal zone of embryo
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
1.09e4
  • 1.09e4
  • 1.16e4
  • 1.17e4
  • 1.18e4
  • 1.18e4
  • 1.20e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000071blood vessel endothelial cell
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
1.11e4
  • 1.11e4
  • 1.48e4
AEIR
  • AEIR
  • AEIR
UBERON:0000061anatomical structure
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.11e4
  • 1.11e4
  • 1.48e4
  • 1.48e4
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000020Gastrula:75%-epiboly
1.13e4
  • 1.13e4
  • 1.19e4
  • 1.21e4
  • 1.54e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
1.14e4
  • 1.14e4
  • 1.34e4
AEIR
  • AEIR
  • AEIR
UBERON:0000965lens of camera-type eye
  • ZFS:0000030Pharyngula:Prim-15
1.17e4
  • 1.17e4
AEIR
  • AEIR
UBERON:0001945superior colliculus
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000035Larval:Protruding-mouth
1.17e4
  • 1.17e4
  • 1.36e4
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.20e4
  • 1.20e4
AEIR
  • AEIR
UBERON:0000926mesoderm
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000025Segmentation:10-13 somites
1.20e4
  • 1.20e4
  • 1.38e4
AEIR
  • AEIR
  • AEIR
UBERON:0002065posterior cardinal vein
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
1.23e4
  • 1.23e4
  • 1.48e4
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.25e4
  • 1.25e4
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.27e4
  • 1.27e4
AEIR
  • AEIR
UBERON:0002342neural crest
  • ZFS:0000029Pharyngula:Prim-5
1.29e4
  • 1.29e4
AEIR
  • AEIR
UBERON:0005425presumptive neural retina
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000028Segmentation:26+ somites
1.29e4
  • 1.29e4
  • 1.48e4
AEIR
  • AEIR
  • AEIR
UBERON:0001894diencephalon
  • ZFS:0000029Pharyngula:Prim-5
1.30e4
  • 1.30e4
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • ZFS:0000029Pharyngula:Prim-5
1.35e4
  • 1.35e4
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.36e4
  • 1.36e4
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
1.37e4
  • 1.37e4
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.39e4
  • 1.39e4
AEIR
  • AEIR
UBERON:0010204tail vasculature
  • ZFS:0000030Pharyngula:Prim-15
1.48e4
  • 1.48e4
AEIR
  • AEIR
UBERON:0007289presumptive rhombomere 1
  • ZFS:0000024Segmentation:5-9 somites
1.48e4
  • 1.48e4
AEIR
  • AEIR
UBERON:2001051caudal division of the internal carotid artery
  • ZFS:0000031Pharyngula:Prim-25
1.48e4
  • 1.48e4
AEIR
  • AEIR
UBERON:2005000basal communicating artery
  • ZFS:0000031Pharyngula:Prim-25
1.48e4
  • 1.48e4
AEIR
  • AEIR
UBERON:0003086caudal artery
  • ZFS:0000029Pharyngula:Prim-5
1.48e4
  • 1.48e4
AEIR
  • AEIR
UBERON:0003118pharyngeal arch artery 1
  • ZFS:0000031Pharyngula:Prim-25
1.48e4
  • 1.48e4
AEIR
  • AEIR
UBERON:2001054lateral dorsal aorta
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
1.48e4
  • 1.48e4
  • 1.48e4
AEIR
  • AEIR
  • AEIR
UBERON:2007034forebrain neural rod
  • ZFS:0000024Segmentation:5-9 somites
1.48e4
  • 1.48e4
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000016Blastula:30%-epiboly
1.53e4
  • 1.53e4
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.63e4
  • 1.63e4
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.67e4
  • 1.67e4
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.70e4
  • 1.70e4
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation
Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.
Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data: