D. rerio Gene: usf2 - ENSDARG00000020228 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000020228
Nameusf2
Descriptionupstream transcription factor 2, c-fos interacting [Source:ZFIN;Acc:ZDB-GENE-030131-8475]
OrganismDanio rerio (zebrafish)
Synonym(s)fb12g11, si:dkey-211g8.3, wu:fb12g11

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000030Pharyngula:Prim-15
860
  • 860
  • 1.15e3
  • 1.72e3
  • 1.81e3
  • 2.41e3
  • 2.47e3
  • 2.71e3
  • 2.97e3
  • 3.97e3
  • 4.25e3
97.09665
  • 97.09665
  • 96.10796
  • 94.18316
  • 93.89850
  • 91.84753
  • 91.66971
  • 90.83877
  • 89.96708
  • 86.57435
  • 85.65366
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
1.05e3
  • 1.05e3
  • 1.16e3
  • 2.68e3
96.46565
  • 96.46565
  • 96.07408
  • 90.95590
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.11e3
  • 1.11e3
96.24491
  • 96.24491
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.37e3
  • 1.37e3
  • 3.26e3
95.37965
  • 95.37965
  • 88.98611
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
1.55e3
  • 1.55e3
  • 1.48e4
94.75035
  • 94.75035
  • 49.91550
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
  • ZFS:0000020Gastrula:75%-epiboly
1.66e3
  • 1.66e3
  • 1.80e3
  • 2.17e3
  • 2.43e3
  • 2.44e3
94.38852
  • 94.38852
  • 93.90631
  • 92.66591
  • 91.78646
  • 91.75171
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.87e3
  • 1.87e3
93.67617
  • 93.67617
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
2.11e3
  • 2.11e3
92.85991
  • 92.85991
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000037Larval:Day 5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000036Larval:Day 4
  • UBERON:0000106zygote stage
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000040Larval:Days 14-20
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
2.22e3
  • 2.22e3
  • 2.40e3
  • 2.59e3
  • 2.59e3
  • 3.15e3
  • 3.38e3
  • 3.40e3
  • 3.46e3
  • 4.45e3
  • 4.78e3
  • 5.63e3
  • 6.73e3
  • 6.98e3
  • 7.12e3
  • 1.45e4
  • 1.45e4
  • 1.46e4
92.49441
  • 92.49441
  • 91.89739
  • 91.25514
  • 91.25186
  • 89.34556
  • 88.57339
  • 88.50792
  • 88.30281
  • 84.94878
  • 83.84745
  • 80.97444
  • 77.25471
  • 76.39724
  • 75.92600
  • 51.00857
  • 50.89926
  • 50.68197
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
2.62e3
  • 2.62e3
91.14368
  • 91.14368
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.63e3
  • 2.63e3
91.12095
  • 91.12095
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
2.64e3
  • 2.64e3
91.08141
  • 91.08141
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
2.86e3
  • 2.86e3
90.33449
  • 90.33449
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
2.96e3
  • 2.96e3
  • 4.42e3
90.00865
  • 90.00865
  • 85.07399
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
3.07e3
  • 3.07e3
  • 6.39e3
  • 6.68e3
89.63845
  • 89.63845
  • 78.41810
  • 77.43836
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
3.15e3
  • 3.15e3
89.35214
  • 89.35214
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
3.15e3
  • 3.15e3
  • 3.28e3
89.34377
  • 89.34377
  • 88.91155
AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
3.38e3
  • 3.38e3
88.57604
  • 88.57604
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
3.65e3
  • 3.65e3
87.68353
  • 87.68353
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
3.80e3
  • 3.80e3
87.15292
  • 87.15292
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
4.13e3
  • 4.13e3
86.02844
  • 86.02844
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
4.48e3
  • 4.48e3
84.85538
  • 84.85538
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
4.66e3
  • 4.66e3
  • 5.22e3
  • 6.95e3
84.26522
  • 84.26522
  • 82.36074
  • 76.52149
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
4.67e3
  • 4.67e3
84.23605
  • 84.23605
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
4.70e3
  • 4.70e3
84.12790
  • 84.12790
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
4.98e3
  • 4.98e3
83.15786
  • 83.15786
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
5.46e3
  • 5.46e3
81.54564
  • 81.54564
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
5.55e3
  • 5.55e3
81.23844
  • 81.23844
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

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