D. rerio Gene: rab2a - ENSDARG00000020261 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000020261
Namerab2a
DescriptionRAB2A, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-011212-2]
OrganismDanio rerio (zebrafish)
Synonym(s)cb75, fb57e06, rab2, wu:fb57e06
Orthologs(s)7 orthologs
Paralog(s)100 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
226
  • 226
  • 485
99.25
  • 99.25
  • 98.38
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
425
  • 425
  • 822
  • 941
  • 1.62e3
98.58
  • 98.58
  • 97.25
  • 96.85
  • 94.58
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
431
  • 431
  • 449
98.56
  • 98.56
  • 98.50
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000011Blastula:1k-cell
484
  • 484
  • 675
  • 2.18e3
  • 2.25e3
  • 2.45e3
98.38
  • 98.38
  • 97.74
  • 92.69
  • 92.46
  • 91.79
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
496
  • 496
  • 538
  • 616
  • 627
  • 659
  • 680
  • 740
  • 791
  • 847
  • 1.06e3
98.34
  • 98.34
  • 98.20
  • 97.94
  • 97.90
  • 97.79
  • 97.73
  • 97.53
  • 97.36
  • 97.17
  • 96.44
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
556
  • 556
98.14
  • 98.14
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000106zygote stage
596
  • 596
  • 620
  • 640
  • 642
  • 646
  • 712
  • 714
  • 742
  • 802
  • 974
  • 990
  • 1.02e3
  • 1.22e3
  • 1.45e3
98.01
  • 98.01
  • 97.93
  • 97.86
  • 97.85
  • 97.84
  • 97.62
  • 97.61
  • 97.52
  • 97.32
  • 96.74
  • 96.69
  • 96.58
  • 95.93
  • 95.16
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
627
  • 627
  • 721
  • 820
97.90
  • 97.90
  • 97.59
  • 97.26
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
672
  • 672
97.75
  • 97.75
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
681
  • 681
97.72
  • 97.72
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
723
  • 723
  • 942
97.58
  • 97.58
  • 96.85
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
805
  • 805
97.31
  • 97.31
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
818
  • 818
97.26
  • 97.26
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000019Gastrula:Shield
988
  • 988
  • 1.08e3
  • 1.31e3
  • 1.54e3
  • 1.54e3
  • 1.54e3
96.70
  • 96.70
  • 96.38
  • 95.63
  • 94.86
  • 94.84
  • 94.84
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.01e3
  • 1.01e3
96.62
  • 96.62
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.02e3
  • 1.02e3
  • 1.17e3
96.59
  • 96.59
  • 96.07
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.02e3
  • 1.02e3
96.58
  • 96.58
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.05e3
  • 1.05e3
96.49
  • 96.49
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.05e3
  • 1.05e3
96.48
  • 96.48
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.06e3
  • 1.06e3
96.47
  • 96.47
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.12e3
  • 1.12e3
96.24
  • 96.24
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.18e3
  • 1.18e3
96.04
  • 96.04
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.22e3
  • 1.22e3
95.93
  • 95.93
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.29e3
  • 1.29e3
95.68
  • 95.68
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.38e3
  • 1.38e3
95.37
  • 95.37
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.43e3
  • 1.43e3
95.21
  • 95.21
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.64e3
  • 1.64e3
94.51
  • 94.51
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.68e3
  • 1.68e3
94.37
  • 94.37
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.98e3
  • 1.98e3
93.37
  • 93.37
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
2.56e3
  • 2.56e3
91.43
  • 91.43
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
2.72e3
  • 2.72e3
90.90
  • 90.90
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
3.79e3
  • 3.79e3
87.31
  • 87.31
AEIR
  • AEIR
UBERON:0001017central nervous system
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
1.26e4
  • 1.26e4
  • 1.28e4
  • 1.39e4
  • 1.39e4
  • 1.42e4
  • 1.49e4
  • 1.49e4
57.68
  • 57.68
  • 57.13
  • 53.55
  • 53.31
  • 52.60
  • 49.97
  • 49.97
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Orthology information comes from OMA : ENSDARG00000020261.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Opisthokonta23 genesCompare expression
Eukaryota100 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000020261.

Cross-references

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