D. rerio Gene: cnih1 - ENSDARG00000020311 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000020311
Namecnih1
Descriptioncornichon family AMPA receptor auxiliary protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1944]
OrganismDanio rerio (zebrafish)
Synonym(s)cnih, wu:fc21b06, wu:fi12c05, zgc:112228, zgc:56103
Orthologs(s)22 orthologs
Paralog(s)3 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
313
  • 313
98.95
  • 98.95
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
395
  • 395
  • 949
  • 1.17e3
  • 1.23e3
  • 2.11e3
  • 2.69e3
98.68
  • 98.68
  • 96.83
  • 96.09
  • 95.90
  • 92.95
  • 91.01
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000016Blastula:30%-epiboly
440
  • 440
  • 503
  • 1.06e3
  • 1.38e3
  • 2.46e3
98.53
  • 98.53
  • 98.32
  • 96.44
  • 95.38
  • 91.78
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
544
  • 544
  • 4.54e3
  • 5.34e3
  • 9.44e3
98.18
  • 98.18
  • 84.82
  • 82.14
  • 68.40
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000037Larval:Day 5
  • ZFS:0000040Larval:Days 14-20
  • UBERON:0000068embryo stage
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
592
  • 592
  • 913
  • 1.19e3
  • 1.19e3
  • 1.33e3
  • 1.35e3
  • 1.76e3
  • 2.24e3
  • 2.31e3
  • 2.31e3
  • 2.55e3
  • 2.66e3
  • 3.18e3
  • 3.19e3
  • 1.29e4
  • 1.37e4
  • 1.50e4
98.02
  • 98.02
  • 96.95
  • 96.03
  • 96.02
  • 95.56
  • 95.49
  • 94.10
  • 92.50
  • 92.27
  • 92.26
  • 91.46
  • 91.08
  • 89.35
  • 89.31
  • 56.68
  • 54.18
  • 49.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
636
  • 636
97.87
  • 97.87
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
865
  • 865
97.11
  • 97.11
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.06e3
  • 1.06e3
96.44
  • 96.44
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • ZFS:0000031Pharyngula:Prim-25
1.21e3
  • 1.21e3
  • 1.33e3
  • 1.52e3
  • 1.64e3
  • 1.69e3
  • 2.62e3
  • 2.89e3
  • 3.00e3
  • 3.40e3
  • 6.39e3
95.95
  • 95.95
  • 95.55
  • 94.90
  • 94.52
  • 94.34
  • 91.23
  • 90.32
  • 89.96
  • 88.62
  • 78.61
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.74e3
  • 1.74e3
  • 4.19e3
94.19
  • 94.19
  • 85.98
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
2.20e3
  • 2.20e3
  • 4.99e3
92.63
  • 92.63
  • 83.31
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
2.21e3
  • 2.21e3
  • 3.11e3
92.61
  • 92.61
  • 89.57
AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
2.34e3
  • 2.34e3
92.18
  • 92.18
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
2.49e3
  • 2.49e3
  • 2.95e3
  • 3.32e3
91.65
  • 91.65
  • 90.14
  • 88.89
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.90e3
  • 2.90e3
90.28
  • 90.28
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
3.43e3
  • 3.43e3
88.50
  • 88.50
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
3.92e3
  • 3.92e3
86.86
  • 86.86
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
4.05e3
  • 4.05e3
86.46
  • 86.46
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
4.08e3
  • 4.08e3
86.35
  • 86.35
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
4.13e3
  • 4.13e3
86.17
  • 86.17
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
4.32e3
  • 4.32e3
85.55
  • 85.55
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
4.37e3
  • 4.37e3
85.38
  • 85.38
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
4.49e3
  • 4.49e3
84.96
  • 84.96
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
4.62e3
  • 4.62e3
84.54
  • 84.54
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
4.67e3
  • 4.67e3
84.38
  • 84.38
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
4.79e3
  • 4.79e3
83.98
  • 83.98
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
4.98e3
  • 4.98e3
83.33
  • 83.33
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
5.00e3
  • 5.00e3
83.26
  • 83.26
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
5.09e3
  • 5.09e3
82.95
  • 82.95
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
5.24e3
  • 5.24e3
82.45
  • 82.45
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
5.99e3
  • 5.99e3
79.95
  • 79.95
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000018Gastrula:Germ-ring
  • UBERON:0000106zygote stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000015Blastula:Dome
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000026Segmentation:14-19 somites
6.40e3
  • 6.40e3
  • 6.40e3
  • 6.40e3
  • 6.64e3
  • 6.89e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.97e3
  • 8.53e3
  • 8.54e3
  • 8.71e3
  • 8.79e3
  • 8.79e3
  • 8.96e3
  • 8.96e3
  • 9.13e3
  • 9.13e3
  • 9.13e3
  • 9.71e3
  • 9.96e3
  • 9.96e3
78.57
  • 78.57
  • 78.57
  • 78.57
  • 77.77
  • 76.92
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 73.32
  • 71.43
  • 71.41
  • 70.82
  • 70.57
  • 70.57
  • 69.99
  • 69.98
  • 69.43
  • 69.43
  • 69.43
  • 67.48
  • 66.66
  • 66.65
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
6.75e3
  • 6.75e3
77.40
  • 77.40
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
7.38e3
  • 7.38e3
75.30
  • 75.30
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
8.97e3
  • 8.97e3
  • 1.06e4
69.97
  • 69.97
  • 64.44
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi16 species16 genesCompare expression
Bilateria22 species22 genesCompare expression

Orthology information comes from OMA : ENSDARG00000020311.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Metazoa2 genesCompare expression
Opisthokonta3 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000020311.

Cross-references

EnsemblENSDARG00000020311 (cnih1)
ZFINZDB-GENE-040426-1944 (cnih1)
EMBLBX927407
Uniprot/SPTREMBLB8A6D8, B8A6D8_DANRE

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