D. rerio Gene: rab7 - ENSDARG00000020497 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000020497
Namerab7
DescriptionRAB7, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040426-1352]
OrganismDanio rerio (zebrafish)
Synonym(s)rab-7, zgc:64058

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
925
  • 925
96.87695
  • 96.87695
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
1.33e3
  • 1.33e3
  • 1.62e3
  • 2.05e3
  • 2.08e3
  • 2.32e3
  • 2.36e3
  • 3.51e3
  • 4.50e3
  • 5.09e3
  • 5.74e3
95.51434
  • 95.51434
  • 94.54115
  • 93.06004
  • 92.96977
  • 92.16197
  • 92.01962
  • 88.12350
  • 84.79036
  • 82.80719
  • 80.61565
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.43e3
  • 1.43e3
95.15995
  • 95.15995
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
1.49e3
  • 1.49e3
  • 2.31e3
  • 2.77e3
94.97970
  • 94.97970
  • 92.19184
  • 90.65527
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.53e3
  • 1.53e3
94.81862
  • 94.81862
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.62e3
  • 1.62e3
94.52791
  • 94.52791
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.65e3
  • 1.65e3
94.42989
  • 94.42989
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000026Segmentation:14-19 somites
  • UBERON:0000106zygote stage
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
1.76e3
  • 1.76e3
  • 2.43e3
  • 2.82e3
  • 3.31e3
  • 3.36e3
  • 3.40e3
  • 3.52e3
  • 4.28e3
  • 4.29e3
  • 4.52e3
  • 4.67e3
  • 4.80e3
  • 5.34e3
  • 5.61e3
  • 1.39e4
  • 1.45e4
  • 1.49e4
94.05229
  • 94.05229
  • 91.77425
  • 90.45763
  • 88.80744
  • 88.64479
  • 88.52845
  • 88.10067
  • 85.53740
  • 85.49111
  • 84.72502
  • 84.22826
  • 83.79271
  • 81.96195
  • 81.03600
  • 52.86343
  • 51.11845
  • 49.79382
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.79e3
  • 1.79e3
  • 1.98e3
93.95483
  • 93.95483
  • 93.30438
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.79e3
  • 1.79e3
93.94318
  • 93.94318
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
2.00e3
  • 2.00e3
93.23340
  • 93.23340
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000104life cycle
2.12e3
  • 2.12e3
  • 4.81e3
  • 1.48e4
92.84771
  • 92.84771
  • 83.75067
  • 49.94254
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
2.15e3
  • 2.15e3
92.73233
  • 92.73233
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
2.24e3
  • 2.24e3
92.43574
  • 92.43574
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
2.27e3
  • 2.27e3
  • 3.97e3
92.32827
  • 92.32827
  • 86.58766
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
2.33e3
  • 2.33e3
92.11874
  • 92.11874
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
2.80e3
  • 2.80e3
90.54677
  • 90.54677
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
3.02e3
  • 3.02e3
89.78625
  • 89.78625
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
3.19e3
  • 3.19e3
  • 4.26e3
  • 5.62e3
89.21585
  • 89.21585
  • 85.60910
  • 81.00665
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
3.49e3
  • 3.49e3
88.21422
  • 88.21422
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
4.99e3
  • 4.99e3
83.14675
  • 83.14675
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
5.09e3
  • 5.09e3
82.80638
  • 82.80638
AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
5.91e3
  • 5.91e3
  • 6.13e3
  • 6.42e3
  • 6.51e3
  • 6.96e3
80.03039
  • 80.03039
  • 79.29650
  • 78.31589
  • 77.99949
  • 76.46494
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
6.07e3
  • 6.07e3
79.48067
  • 79.48067
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000026Segmentation:14-19 somites
6.34e3
  • 6.34e3
  • 6.91e3
  • 1.13e4
  • 1.18e4
  • 1.22e4
  • 1.23e4
  • 1.23e4
  • 1.23e4
  • 1.26e4
  • 1.28e4
  • 1.28e4
  • 1.38e4
78.56468
  • 78.56468
  • 76.65821
  • 61.88109
  • 59.97634
  • 58.80324
  • 58.31136
  • 58.31136
  • 58.31136
  • 57.47466
  • 56.64807
  • 56.64807
  • 53.31307
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
6.65e3
  • 6.65e3
77.53377
  • 77.53377
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
8.41e3
  • 8.41e3
71.58322
  • 71.58322
AEIR
  • AEIR
UBERON:0010170region of neural crest
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
8.63e3
  • 8.63e3
  • 8.88e3
  • 9.42e3
70.82487
  • 70.82487
  • 69.99324
  • 68.17336
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
9.12e3
  • 9.12e3
  • 9.73e3
  • 9.81e3
69.18723
  • 69.18723
  • 67.11669
  • 66.84197
AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

Do not show this banner again