D. rerio Gene: si:dkey-77f5.10 - ENSDARG00000020548 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000020548
Namesi:dkey-77f5.10
Descriptionsi:dkey-77f5.10 [Source:ZFIN;Acc:ZDB-GENE-131121-133]
OrganismDanio rerio (zebrafish)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.09e4
  • 1.09e4
63.18929
  • 63.18929
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.42e4
  • 1.42e4
52.03218
  • 52.03218
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.45e4
  • 1.45e4
51.12382
  • 51.12382
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.79e4
  • 1.79e4
39.66843
  • 39.66843
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
1.94e4
  • 1.94e4
34.51067
  • 34.51067
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.22e4
  • 2.22e4
24.81030
  • 24.81030
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
2.51e4
  • 2.51e4
15.07573
  • 15.07573
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLBX000999
EnsemblENSDARG00000020548 (si:dkey-77f5.10)
Uniprot/SPTREMBLE7F0M5, E7F0M5_DANRE
ZFINZDB-GENE-131121-133 (si:dkey-77f5.10)

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