D. rerio Gene: atp2a1 - ENSDARG00000020574 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000020574
Nameatp2a1
DescriptionATPase, Ca++ transporting, cardiac muscle, fast twitch 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
OrganismDanio rerio (zebrafish)
Synonym(s)acc, accordion, cb279, serca, serca1, wu:cegs655, wu:fb17h11, wu:fb19b10, zgc:92110

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreSources
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
13.0
  • 13.0
  • 33.2
  • 43.5
  • 50.0
  • 104
  • 180
  • 285
  • 2.20e3
  • 1.42e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000036Larval:Day 4
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000028Segmentation:26+ somites
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000049segmentation
25.7
  • 25.7
  • 29.9
  • 59.9
  • 117
  • 152
  • 195
  • 236
  • 2.82e3
  • 7.55e3
  • 8.43e3
  • 1.23e4
  • 1.32e4
  • 1.48e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
38.9
  • 38.9
  • 46.1
  • 112
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
203
  • 203
  • 2.33e3
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
320
  • 320
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
363
  • 363
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
543
  • 543
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
730
  • 730
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
940
  • 940
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.04e3
  • 1.04e3
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.11e3
  • 1.11e3
AEIR
  • AEIR
UBERON:0001015musculature
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.64e3
  • 1.64e3
  • 2.11e3
  • 2.78e3
  • 9.42e3
  • 1.35e4
  • 1.48e4
  • 1.48e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000025Segmentation:10-13 somites
1.85e3
  • 1.85e3
  • 2.96e3
  • 5.92e3
  • 6.17e3
  • 7.15e3
  • 1.33e4
  • 1.65e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000151pectoral fin
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000033Hatching:Long-pec
2.47e3
  • 2.47e3
  • 6.34e3
  • 7.40e3
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
4.11e3
  • 4.11e3
  • 1.53e4
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000066fully formed stage
6.26e3
  • 6.26e3
  • 1.18e4
AEIR
  • AEIR
  • AEIR
UBERON:0005886post-hyoid pharyngeal arch skeleton
  • ZFS:0000037Larval:Day 5
6.34e3
  • 6.34e3
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
8.21e3
  • 8.21e3
AEIR
  • AEIR
ZFA:0000003adaxial cell (Danio)
  • ZFS:0000026Segmentation:14-19 somites
8.33e3
  • 8.33e3
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
9.57e3
  • 9.57e3
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • UBERON:0000066fully formed stage
1.09e4
  • 1.09e4
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
1.11e4
  • 1.11e4
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.12e4
  • 1.12e4
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000025Segmentation:10-13 somites
1.15e4
  • 1.15e4
AEIR
  • AEIR
UBERON:0001042chordate pharynx
  • ZFS:0000031Pharyngula:Prim-25
1.37e4
  • 1.37e4
AEIR
  • AEIR
UBERON:0001774skeletal muscle of trunk
  • ZFS:0000029Pharyngula:Prim-5
1.48e4
  • 1.48e4
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.79e4
  • 1.79e4
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.82e4
  • 1.82e4
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation
Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.
Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLAB178533, AY737278, BC085636, FP016243
EnsemblENSDARG00000020574 (atp2a1)
Uniprot/SPTREMBLE9QCD9, E9QCD9_DANRE, E9QF60, E9QF60_DANRE, E9QGF0, E9QGF0_DANRE, Q5U3A4, Q5U3A4_DANRE, Q642Z0, Q642Z0_DANRE
ZFINZDB-GENE-020905-1 (atp2a1)

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