D. rerio Gene: emc3 - ENSDARG00000020607 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000020607
Nameemc3
DescriptionER membrane protein complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2904]
OrganismDanio rerio (zebrafish)
Synonym(s)loc55831, pob, q5ifi3, tmem111, wu:fi32f05, wu:fj63h08, zgc:63727

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreSources
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.38e3
  • 1.38e3
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
1.86e3
  • 1.86e3
  • 2.04e3
  • 2.35e3
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
2.06e3
  • 2.06e3
  • 3.43e3
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
2.39e3
  • 2.39e3
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
2.52e3
  • 2.52e3
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
2.65e3
  • 2.65e3
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000104life cycle
2.84e3
  • 2.84e3
  • 2.93e3
  • 1.33e4
  • 1.48e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
2.89e3
  • 2.89e3
  • 3.47e3
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
2.95e3
  • 2.95e3
  • 3.06e3
  • 3.09e3
  • 3.15e3
  • 3.48e3
  • 3.54e3
  • 4.21e3
  • 4.94e3
  • 4.97e3
  • 5.29e3
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
3.06e3
  • 3.06e3
  • 4.10e3
  • 5.01e3
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
3.24e3
  • 3.24e3
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
3.30e3
  • 3.30e3
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
3.53e3
  • 3.53e3
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
3.83e3
  • 3.83e3
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
4.04e3
  • 4.04e3
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
4.23e3
  • 4.23e3
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
4.29e3
  • 4.29e3
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
4.43e3
  • 4.43e3
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000020Gastrula:75%-epiboly
4.46e3
  • 4.46e3
  • 4.46e3
  • 4.62e3
  • 4.91e3
  • 5.00e3
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000037Larval:Day 5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000036Larval:Day 4
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000042Juvenile:Days 30-44
  • UBERON:0000106zygote stage
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000068embryo stage
  • UBERON:0000066fully formed stage
4.57e3
  • 4.57e3
  • 5.23e3
  • 5.29e3
  • 5.41e3
  • 5.51e3
  • 5.59e3
  • 5.88e3
  • 5.90e3
  • 5.96e3
  • 6.19e3
  • 6.39e3
  • 6.40e3
  • 6.68e3
  • 7.57e3
  • 1.02e4
  • 1.11e4
  • 1.13e4
  • 1.39e4
  • 1.43e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
5.61e3
  • 5.61e3
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
5.67e3
  • 5.67e3
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
6.60e3
  • 6.60e3
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
7.43e3
  • 7.43e3
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
7.96e3
  • 7.96e3
  • 1.11e4
  • 1.11e4
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
8.63e3
  • 8.63e3
  • 9.25e3
  • 1.11e4
  • 1.20e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2001076intestinal bulb
  • ZFS:0000037Larval:Day 5
8.88e3
  • 8.88e3
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
1.03e4
  • 1.03e4
  • 1.48e4
AEIR
  • AEIR
  • AEIR
UBERON:2000088YSL
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
1.11e4
  • 1.11e4
  • 1.13e4
  • 1.13e4
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0010312immature eye
  • ZFS:0000029Pharyngula:Prim-5
1.34e4
  • 1.34e4
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation
Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.
Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLAY398377, AY745978, BC055222
EnsemblENSDARG00000020607 (emc3)
Uniprot/SWISSPROTEMC3_DANRE, Q7SXW4
ZFINZDB-GENE-040426-2904 (emc3)

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