D. rerio Gene: snap25a - ENSDARG00000020609 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000020609
Namesnap25a
Descriptionsynaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
OrganismDanio rerio (zebrafish)
Synonym(s)etid17571.20, etid69167.20, fj42b02, fj45g04, fj48c02, o93578, q5tz65, q6p3l7, snap, snap,gn snap25.1, snap25, snap25.1, wu:fj42b02, wu:fj45g04, wu:fj48c02

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreSources
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
  • ZFS:0000031Pharyngula:Prim-25
18.4
  • 18.4
  • 1.65e3
  • 2.75e3
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
172
  • 172
  • 281
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000106zygote stage
  • UBERON:0000066fully formed stage
  • ZFS:0000024Segmentation:5-9 somites
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000026Segmentation:14-19 somites
276
  • 276
  • 582
  • 738
  • 900
  • 1.10e3
  • 1.96e3
  • 4.15e3
  • 1.20e4
  • 1.43e4
  • 1.43e4
  • 1.45e4
  • 1.48e4
  • 1.51e4
  • 1.52e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
392
  • 392
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
398
  • 398
  • 842
  • 1.82e3
  • 2.47e3
  • 3.22e3
  • 3.39e3
  • 4.08e3
  • 1.22e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
566
  • 566
  • 620
  • 895
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
3.27e3
  • 3.27e3
AEIR
  • AEIR
UBERON:0001792ganglionic layer of retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000032Pharyngula:High-pec
4.23e3
  • 4.23e3
  • 8.88e3
  • 9.86e3
  • 1.06e4
  • 1.11e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000010peripheral nervous system
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000033Hatching:Long-pec
4.93e3
  • 4.93e3
  • 5.92e3
AEIR
  • AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
5.52e3
  • 5.52e3
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000032Pharyngula:High-pec
  • UBERON:0000066fully formed stage
5.56e3
  • 5.56e3
  • 6.83e3
  • 8.87e3
  • 1.16e4
  • 1.18e4
  • 1.22e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000540neuron
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000032Pharyngula:High-pec
5.92e3
  • 5.92e3
  • 6.48e3
  • 8.88e3
  • 9.86e3
  • 1.11e4
  • 1.11e4
  • 1.14e4
  • 1.20e4
  • 1.27e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001017central nervous system
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000033Hatching:Long-pec
6.34e3
  • 6.34e3
  • 8.46e3
AEIR
  • AEIR
  • AEIR
UBERON:0001791inner nuclear layer of retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
6.58e3
  • 6.58e3
  • 9.86e3
  • 9.86e3
  • 1.21e4
  • 1.23e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
7.15e3
  • 7.15e3
AEIR
  • AEIR
UBERON:0001891midbrain
  • ZFS:0000031Pharyngula:Prim-25
7.84e3
  • 7.84e3
AEIR
  • AEIR
UBERON:0002028hindbrain
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
9.01e3
  • 9.01e3
  • 1.27e4
AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
9.12e3
  • 9.12e3
AEIR
  • AEIR
UBERON:0001714cranial ganglion
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
9.25e3
  • 9.25e3
  • 9.86e3
  • 9.87e3
  • 9.87e3
  • 9.87e3
  • 1.11e4
  • 1.16e4
  • 1.16e4
  • 1.16e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • ZFS:0000031Pharyngula:Prim-25
9.42e3
  • 9.42e3
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.02e4
  • 1.02e4
AEIR
  • AEIR
UBERON:0004128optic vesicle
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
1.04e4
  • 1.04e4
  • 1.04e4
  • 1.04e4
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000024Segmentation:5-9 somites
  • UBERON:0000104life cycle
1.13e4
  • 1.13e4
  • 1.26e4
  • 1.48e4
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.23e4
  • 1.23e4
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
1.24e4
  • 1.24e4
  • 1.48e4
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
1.28e4
  • 1.28e4
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000066fully formed stage
1.33e4
  • 1.33e4
  • 1.36e4
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.35e4
  • 1.35e4
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.36e4
  • 1.36e4
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.43e4
  • 1.43e4
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.49e4
  • 1.49e4
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
1.51e4
  • 1.51e4
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.69e4
  • 1.69e4
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.74e4
  • 1.74e4
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation
Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.
Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLAF091593, BC063942, BX465184, BX470246
EnsemblENSDARG00000020609 (snap25a)
Uniprot/SPTREMBLU3JAS0, U3JAS0_DANRE
Uniprot/SWISSPROTQ5TZ66, SN25A_DANRE
ZFINZDB-GENE-980526-468 (snap25a)

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