D. rerio Gene: jak1 - ENSDARG00000020625 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000020625
Namejak1
DescriptionJanus kinase 1 [Source:ZFIN;Acc:ZDB-GENE-980526-142]
OrganismDanio rerio (zebrafish)
Synonym(s)etid309794.6, fb93e10, jak1 kinase, wu:fb93e10
Orthologs(s)22 orthologs
Paralog(s)4 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.66e3
  • 1.66e3
94.44
  • 94.44
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
2.31e3
  • 2.31e3
92.26
  • 92.26
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
2.57e3
  • 2.57e3
91.41
  • 91.41
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
2.64e3
  • 2.64e3
  • 8.14e3
91.17
  • 91.17
  • 72.74
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.85e3
  • 2.85e3
90.45
  • 90.45
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.87e3
  • 2.87e3
90.38
  • 90.38
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0000106zygote stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000019Gastrula:Shield
3.02e3
  • 3.02e3
  • 3.10e3
  • 3.62e3
  • 3.96e3
  • 4.13e3
  • 4.16e3
  • 4.26e3
  • 4.34e3
  • 4.36e3
  • 5.27e3
  • 6.17e3
  • 6.20e3
  • 6.31e3
  • 6.33e3
89.90
  • 89.90
  • 89.62
  • 87.88
  • 86.75
  • 86.17
  • 86.08
  • 85.73
  • 85.49
  • 85.39
  • 82.37
  • 79.35
  • 79.25
  • 78.86
  • 78.82
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
3.02e3
  • 3.02e3
  • 4.12e3
89.90
  • 89.90
  • 86.22
AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
3.08e3
  • 3.08e3
89.68
  • 89.68
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
3.14e3
  • 3.14e3
89.48
  • 89.48
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
3.23e3
  • 3.23e3
89.18
  • 89.18
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
3.35e3
  • 3.35e3
88.80
  • 88.80
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
3.77e3
  • 3.77e3
  • 4.95e3
87.37
  • 87.37
  • 83.42
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
4.00e3
  • 4.00e3
86.61
  • 86.61
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
4.10e3
  • 4.10e3
86.27
  • 86.27
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000024Segmentation:5-9 somites
  • UBERON:0004707pharyngula stage
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
4.14e3
  • 4.14e3
  • 4.74e3
  • 5.45e3
  • 5.85e3
  • 6.43e3
  • 6.54e3
  • 6.84e3
  • 7.44e3
  • 9.23e3
  • 1.07e4
86.14
  • 86.14
  • 84.12
  • 81.75
  • 80.40
  • 78.46
  • 78.09
  • 77.11
  • 75.08
  • 69.10
  • 64.33
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
4.25e3
  • 4.25e3
85.76
  • 85.76
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
4.27e3
  • 4.27e3
  • 6.47e3
  • 8.24e3
  • 8.66e3
85.72
  • 85.72
  • 78.34
  • 72.41
  • 71.02
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
4.82e3
  • 4.82e3
  • 5.72e3
  • 5.91e3
83.85
  • 83.85
  • 80.84
  • 80.20
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
5.43e3
  • 5.43e3
81.81
  • 81.81
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
6.21e3
  • 6.21e3
  • 6.24e3
  • 6.49e3
  • 8.95e3
  • 9.38e3
79.22
  • 79.22
  • 79.10
  • 78.28
  • 70.02
  • 68.61
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
6.52e3
  • 6.52e3
  • 7.60e3
78.16
  • 78.16
  • 74.55
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
6.53e3
  • 6.53e3
  • 6.64e3
  • 7.26e3
  • 7.33e3
  • 7.65e3
  • 9.05e3
78.12
  • 78.12
  • 77.76
  • 75.70
  • 75.46
  • 74.39
  • 69.71
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
6.56e3
  • 6.56e3
78.04
  • 78.04
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
7.67e3
  • 7.67e3
74.33
  • 74.33
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
7.74e3
  • 7.74e3
74.08
  • 74.08
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
7.99e3
  • 7.99e3
73.25
  • 73.25
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
8.00e3
  • 8.00e3
73.23
  • 73.23
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
8.83e3
  • 8.83e3
70.45
  • 70.45
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
8.90e3
  • 8.90e3
  • 1.15e4
  • 1.18e4
70.19
  • 70.19
  • 61.34
  • 60.39
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2001073axial vasculature
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
9.96e3
  • 9.96e3
  • 9.96e3
66.66
  • 66.66
  • 66.66
AEIR
  • AEIR
  • AEIR
UBERON:0001637artery
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
1.12e4
  • 1.12e4
  • 1.12e4
  • 1.15e4
62.49
  • 62.49
  • 62.49
  • 61.53
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001714cranial ganglion
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
1.12e4
  • 1.12e4
  • 1.17e4
  • 1.17e4
  • 1.17e4
62.49
  • 62.49
  • 60.70
  • 60.70
  • 60.70
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001638vein
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
1.15e4
  • 1.15e4
  • 1.15e4
  • 1.20e4
61.53
  • 61.53
  • 61.53
  • 59.98
AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi17 species17 genesCompare expression
Bilateria22 species22 genesCompare expression

Orthology information comes from OMA : ENSDARG00000020625.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata4 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000020625.

Cross-references

EnsemblENSDARG00000020625 (jak1)
ZFINZDB-GENE-980526-142 (jak1)
EMBLAL954175, CT989254
Uniprot/SPTREMBLF1R5C7, F1R5C7_DANRE

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