D. rerio Gene: si:ch73-177h5.2 - ENSDARG00000020812 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000020812
Namesi:ch73-177h5.2
Descriptionsi:ch73-177h5.2 [Source:ZFIN;Acc:ZDB-GENE-081104-247]
OrganismDanio rerio (zebrafish)
Orthologs(s)1 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.50e4
  • 1.50e4
49.65
  • 49.65
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.57e4
  • 1.57e4
47.52
  • 47.52
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.61e4
  • 1.61e4
45.94
  • 45.94
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
1.63e4
  • 1.63e4
45.26
  • 45.26
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.65e4
  • 1.65e4
44.77
  • 44.77
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.73e4
  • 1.73e4
42.07
  • 42.07
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.90e4
  • 1.90e4
36.44
  • 36.44
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.91e4
  • 1.91e4
36.14
  • 36.14
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
2.08e4
  • 2.08e4
  • 2.17e4
  • 2.54e4
30.45
  • 30.45
  • 27.36
  • 15.04
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.14e4
  • 2.14e4
28.44
  • 28.44
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.30e4
  • 2.30e4
22.96
  • 22.96
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi1 species1 geneCompare expression

Orthology information comes from OMA : ENSDARG00000020812.

Cross-references

EnsemblENSDARG00000020812 (si:ch73-177h5.2)
ZFINZDB-GENE-081104-247 (si:ch73-177h5.2)
Uniprot/SPTREMBLF1QQM9, F1QQM9_DANRE, F1QWC7, F1QWC7_DANRE

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