D. rerio Gene: pck2 - ENSDARG00000020956 - Danio rerio (zebrafish)

Gene Information

Ensembl IDENSDARG00000020956
Namepck2
Descriptionphosphoenolpyruvate carboxykinase 2 (mitochondrial) [Source:ZFIN;Acc:ZDB-GENE-040426-2266]
OrganismDanio rerio (zebrafish)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreSources
UBERON:0000468multi-cellular organism
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
282
  • 282
  • 301
  • 343
  • 443
  • 666
  • 1.14e3
  • 1.27e3
  • 1.62e3
  • 1.80e3
  • 2.01e3
  • 2.56e3
  • 3.07e3
  • 3.52e3
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
369
  • 369
  • 426
  • 501
  • 616
  • 5.61e3
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
504
  • 504
  • 518
  • 746
  • 1.61e3
  • 1.91e3
  • 1.92e3
  • 3.03e3
  • 3.10e3
  • 3.63e3
  • 3.93e3
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
722
  • 722
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000035Larval:Protruding-mouth
865
  • 865
  • 1.11e4
  • 1.11e4
  • 1.20e4
  • 1.27e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.34e3
  • 1.34e3
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
1.47e3
  • 1.47e3
  • 3.02e3
  • 3.41e3
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.76e3
  • 1.76e3
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.87e3
  • 1.87e3
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
2.80e3
  • 2.80e3
  • 8.87e3
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
3.79e3
  • 3.79e3
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
4.68e3
  • 4.68e3
  • 1.10e4
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
5.21e3
  • 5.21e3
  • 1.62e4
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
5.72e3
  • 5.72e3
AEIR
  • AEIR
UBERON:2000088YSL
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
6.97e3
  • 6.97e3
  • 8.88e3
  • 8.88e3
  • 8.88e3
  • 9.87e3
  • 1.02e4
  • 1.04e4
  • 1.04e4
  • 1.06e4
  • 1.06e4
  • 1.06e4
  • 1.06e4
  • 1.11e4
  • 1.13e4
  • 1.13e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
7.17e3
  • 7.17e3
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
7.19e3
  • 7.19e3
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
7.31e3
  • 7.31e3
AEIR
  • AEIR
UBERON:2001076intestinal bulb
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000037Larval:Day 5
7.40e3
  • 7.40e3
  • 1.08e4
  • 1.15e4
  • 1.18e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.10e4
  • 1.10e4
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
1.18e4
  • 1.18e4
  • 1.25e4
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
1.18e4
  • 1.18e4
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.19e4
  • 1.19e4
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.21e4
  • 1.21e4
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.31e4
  • 1.31e4
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000016Blastula:30%-epiboly
1.32e4
  • 1.32e4
AEIR
  • AEIR
UBERON:2000106extension
  • ZFS:0000029Pharyngula:Prim-5
1.48e4
  • 1.48e4
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.53e4
  • 1.53e4
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation
Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.
Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data: