D. rerio Gene: slc35a3b - ENSDARG00000020981 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000020981
Nameslc35a3b
Descriptionsolute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member A3b [Source:ZFIN;Acc:ZDB-GENE-050417-460]
OrganismDanio rerio (zebrafish)
Synonym(s)si:ch211-112d19.3, zgc:110602
Orthologs(s)19 orthologs
Paralog(s)4 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000468multi-cellular organism
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • UBERON:0000066fully formed stage
2.20e3
  • 2.20e3
  • 9.96e3
  • 1.07e4
  • 1.44e4
  • 1.50e4
92.65
  • 92.65
  • 66.66
  • 64.27
  • 51.82
  • 49.81
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
7.35e3
  • 7.35e3
  • 7.92e3
75.40
  • 75.40
  • 73.49
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
8.16e3
  • 8.16e3
  • 1.50e4
72.67
  • 72.67
  • 49.89
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
1.00e4
  • 1.00e4
  • 1.23e4
66.53
  • 66.53
  • 58.68
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
1.08e4
  • 1.08e4
  • 1.47e4
63.73
  • 63.73
  • 50.88
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.10e4
  • 1.10e4
63.24
  • 63.24
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.22e4
  • 1.22e4
59.25
  • 59.25
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.29e4
  • 1.29e4
56.81
  • 56.81
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.30e4
  • 1.30e4
56.42
  • 56.42
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
1.39e4
  • 1.39e4
  • 1.46e4
  • 1.53e4
  • 1.92e4
  • 2.01e4
53.61
  • 53.61
  • 51.18
  • 48.93
  • 35.55
  • 32.80
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.40e4
  • 1.40e4
52.99
  • 52.99
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.47e4
  • 1.47e4
50.88
  • 50.88
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.47e4
  • 1.47e4
50.83
  • 50.83
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.50e4
  • 1.50e4
49.85
  • 49.85
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.52e4
  • 1.52e4
49.14
  • 49.14
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.52e4
  • 1.52e4
49.00
  • 49.00
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.67e4
  • 1.67e4
  • 1.74e4
44.19
  • 44.19
  • 41.76
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.67e4
  • 1.67e4
44.12
  • 44.12
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.68e4
  • 1.68e4
43.71
  • 43.71
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.78e4
  • 1.78e4
40.50
  • 40.50
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
1.81e4
  • 1.81e4
39.39
  • 39.39
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
2.12e4
  • 2.12e4
28.98
  • 28.98
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi17 species18 genesCompare expression
Bilateria18 species19 genesCompare expression

Orthology information comes from OMA : ENSDARG00000020981.

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Vertebrata1 geneCompare expression
Opisthokonta2 genesCompare expression
Eukaryota4 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000020981.

Cross-references

EnsemblENSDARG00000020981 (slc35a3b)
ZFINZDB-GENE-050417-460 (slc35a3b)
EMBLCR956623, CU062648, FP067419, FP475879
Uniprot/SPTREMBLF1QZ80, F1QZ80_DANRE, X1WD34, X1WD34_DANRE

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