D. rerio Gene: alas1 - ENSDARG00000021059 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000021059
Namealas1
Descriptionaminolevulinate, delta-, synthase 1 [Source:ZFIN;Acc:ZDB-GENE-001229-2]
OrganismDanio rerio (zebrafish)
Synonym(s)alas-n, wu:fb58d01, wu:fi12g09
Orthologs(s)23 orthologs
Paralog(s)4 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
344
  • 344
  • 775
  • 1.36e3
  • 1.97e3
  • 2.58e3
  • 2.78e3
98.85
  • 98.85
  • 97.41
  • 95.46
  • 93.39
  • 91.36
  • 90.68
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
454
  • 454
98.48
  • 98.48
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0000106zygote stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000049segmentation
457
  • 457
  • 516
  • 517
  • 618
  • 874
  • 1.03e3
  • 1.61e3
  • 1.93e3
  • 1.98e3
  • 2.20e3
  • 2.24e3
  • 2.77e3
  • 2.87e3
  • 3.04e3
  • 8.21e3
  • 1.24e4
  • 1.49e4
  • 1.49e4
  • 1.49e4
98.47
  • 98.47
  • 98.27
  • 98.27
  • 97.93
  • 97.08
  • 96.56
  • 94.60
  • 93.53
  • 93.39
  • 92.64
  • 92.50
  • 90.73
  • 90.39
  • 89.83
  • 72.51
  • 58.54
  • 50.20
  • 49.98
  • 49.95
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
464
  • 464
98.45
  • 98.45
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
497
  • 497
98.34
  • 98.34
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
567
  • 567
  • 568
  • 636
  • 1.03e3
  • 1.16e3
98.11
  • 98.11
  • 98.10
  • 97.87
  • 96.55
  • 96.12
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
620
  • 620
  • 2.88e3
97.93
  • 97.93
  • 90.36
AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
644
  • 644
97.85
  • 97.85
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
958
  • 958
96.80
  • 96.80
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
970
  • 970
96.76
  • 96.76
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.16e3
  • 1.16e3
96.12
  • 96.12
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.20e3
  • 1.20e3
95.97
  • 95.97
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.24e3
  • 1.24e3
95.84
  • 95.84
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • UBERON:0004707pharyngula stage
1.28e3
  • 1.28e3
  • 2.15e3
  • 2.28e3
  • 2.30e3
  • 2.63e3
  • 2.77e3
  • 2.86e3
  • 3.52e3
  • 3.62e3
  • 3.92e3
95.71
  • 95.71
  • 92.82
  • 92.36
  • 92.31
  • 91.20
  • 90.73
  • 90.43
  • 88.21
  • 87.87
  • 86.87
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.30e3
  • 1.30e3
95.66
  • 95.66
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.30e3
  • 1.30e3
95.66
  • 95.66
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
1.33e3
  • 1.33e3
  • 1.46e3
  • 1.77e3
95.54
  • 95.54
  • 95.13
  • 94.09
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
1.39e3
  • 1.39e3
  • 1.43e3
95.35
  • 95.35
  • 95.21
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.61e3
  • 1.61e3
94.62
  • 94.62
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
1.73e3
  • 1.73e3
  • 4.67e3
  • 9.60e3
94.21
  • 94.21
  • 84.37
  • 67.85
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.80e3
  • 1.80e3
93.97
  • 93.97
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.82e3
  • 1.82e3
  • 2.49e3
93.92
  • 93.92
  • 91.66
AEIR
  • AEIR
  • AEIR
UBERON:0001555digestive tract
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000066fully formed stage
2.13e3
  • 2.13e3
  • 5.60e3
  • 1.47e4
92.86
  • 92.86
  • 81.25
  • 50.71
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
2.31e3
  • 2.31e3
92.27
  • 92.27
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
2.35e3
  • 2.35e3
92.13
  • 92.13
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
2.40e3
  • 2.40e3
91.97
  • 91.97
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
2.92e3
  • 2.92e3
90.22
  • 90.22
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
2.98e3
  • 2.98e3
  • 3.04e3
  • 3.81e3
  • 5.44e3
90.02
  • 90.02
  • 89.83
  • 87.24
  • 81.80
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
3.06e3
  • 3.06e3
89.77
  • 89.77
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
3.81e3
  • 3.81e3
  • 4.07e3
87.23
  • 87.23
  • 86.37
AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
5.47e3
  • 5.47e3
81.67
  • 81.67
AEIR
  • AEIR
UBERON:0003051ear vesicle
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000028Segmentation:26+ somites
7.47e3
  • 7.47e3
  • 1.12e4
  • 1.15e4
  • 1.17e4
  • 1.18e4
  • 1.25e4
  • 1.28e4
74.99
  • 74.99
  • 62.48
  • 61.34
  • 60.84
  • 60.50
  • 58.29
  • 57.12
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000080mesonephros
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
7.59e3
  • 7.59e3
  • 1.37e4
74.60
  • 74.60
  • 54.10
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
8.49e3
  • 8.49e3
71.59
  • 71.59
AEIR
  • AEIR
UBERON:0003060pronephric duct
  • ZFS:0000037Larval:Day 5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000028Segmentation:26+ somites
9.96e3
  • 9.96e3
  • 1.12e4
  • 1.12e4
  • 1.14e4
  • 1.20e4
  • 1.20e4
  • 1.21e4
  • 1.26e4
66.67
  • 66.67
  • 62.48
  • 62.48
  • 61.75
  • 59.98
  • 59.98
  • 59.36
  • 57.87
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002120pronephros
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
1.17e4
  • 1.17e4
  • 1.19e4
  • 1.26e4
  • 1.28e4
  • 1.28e4
60.70
  • 60.70
  • 59.99
  • 57.68
  • 57.14
  • 57.14
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007269pectoral appendage musculature
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
1.18e4
  • 1.18e4
  • 1.18e4
60.50
  • 60.50
  • 60.50
AEIR
  • AEIR
  • AEIR
UBERON:0003055periderm
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
1.21e4
  • 1.21e4
  • 1.28e4
  • 1.28e4
  • 1.28e4
  • 1.28e4
  • 1.28e4
  • 1.28e4
  • 1.29e4
  • 1.29e4
  • 1.33e4
59.36
  • 59.36
  • 57.14
  • 57.14
  • 57.14
  • 57.14
  • 57.14
  • 57.14
  • 56.65
  • 56.65
  • 55.53
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007383enveloping layer of ectoderm
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
1.22e4
  • 1.22e4
  • 1.22e4
  • 1.24e4
  • 1.34e4
  • 1.34e4
  • 1.34e4
59.08
  • 59.08
  • 59.08
  • 58.32
  • 54.99
  • 54.99
  • 54.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2000058polster
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
1.33e4
  • 1.33e4
  • 1.33e4
  • 1.34e4
55.53
  • 55.53
  • 55.53
  • 54.97
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001434skeletal system
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
1.49e4
  • 1.49e4
  • 1.49e4
50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.59e4
  • 1.59e4
46.68
  • 46.68
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi18 species18 genesCompare expression
Bilateria23 species23 genesCompare expression

Orthology information comes from OMA : ENSDARG00000021059.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Deuterostomia1 geneCompare expression
Eukaryota4 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000021059.

Cross-references

EnsemblENSDARG00000021059 (alas1)
ZFINZDB-GENE-001229-2 (alas1)
Uniprot/SPTREMBLF1RB22, F1RB22_DANRE

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