D. rerio Gene: serpind1 - ENSDARG00000021208 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000021208
Nameserpind1
Descriptionserpin peptidase inhibitor, clade D (heparin cofactor), member 1 [Source:ZFIN;Acc:ZDB-GENE-030711-2]
OrganismDanio rerio (zebrafish)
Synonym(s)hcii

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
2.21e3
  • 2.21e3
92.52700
  • 92.52700
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
5.29e3
  • 5.29e3
82.13712
  • 82.13712
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000035Larval:Protruding-mouth
5.29e3
  • 5.29e3
  • 9.25e3
  • 1.11e4
  • 1.16e4
82.10684
  • 82.10684
  • 68.73648
  • 62.49323
  • 60.69907
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
7.51e3
  • 7.51e3
74.63032
  • 74.63032
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
8.21e3
  • 8.21e3
72.25424
  • 72.25424
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
9.74e3
  • 9.74e3
  • 1.15e4
  • 1.29e4
  • 1.49e4
  • 1.51e4
  • 1.68e4
  • 1.70e4
  • 1.74e4
  • 1.77e4
  • 1.77e4
67.08634
  • 67.08634
  • 61.02911
  • 56.47434
  • 49.63581
  • 49.05188
  • 43.10182
  • 42.68146
  • 41.16749
  • 40.27188
  • 40.13929
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
1.11e4
  • 1.11e4
62.36797
  • 62.36797
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.35e4
  • 1.35e4
54.41502
  • 54.41502
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
1.47e4
  • 1.47e4
  • 1.48e4
  • 1.49e4
  • 1.57e4
  • 1.57e4
  • 1.76e4
  • 1.77e4
  • 1.77e4
  • 1.80e4
  • 1.82e4
  • 1.82e4
  • 1.82e4
50.19874
  • 50.19874
  • 49.91719
  • 49.80903
  • 47.08230
  • 46.83203
  • 40.49306
  • 40.25570
  • 40.05343
  • 39.29189
  • 38.58458
  • 38.48958
  • 38.43499
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.76e4
  • 1.76e4
40.64162
  • 40.64162
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
1.78e4
  • 1.78e4
39.92466
  • 39.92466
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.79e4
  • 1.79e4
  • 1.83e4
  • 1.83e4
39.65217
  • 39.65217
  • 38.13050
  • 38.12850
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
1.98e4
  • 1.98e4
33.16916
  • 33.16916
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
2.02e4
  • 2.02e4
31.65126
  • 31.65126
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.14e4
  • 2.14e4
27.78463
  • 27.78463
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.29e4
  • 2.29e4
22.74561
  • 22.74561
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLCR788303, CU326361
EnsemblENSDARG00000021208 (serpind1)
Uniprot/SPTREMBLB0V3R7, B0V3R7_DANRE
ZFINZDB-GENE-030711-2 (serpind1)

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