D. rerio Gene: nkx2.7 - ENSDARG00000021232 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000021232
Namenkx2.7
DescriptionNK2 transcription factor related 7 [Source:ZFIN;Acc:ZDB-GENE-990415-179]
OrganismDanio rerio (zebrafish)
Synonym(s)nk2.7, nkx2-7, zgc:100762

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000061anatomical structure
  • ZFS:0000024Segmentation:5-9 somites
2.49e3
  • 2.49e3
91.67
  • 91.67
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
3.09e3
  • 3.09e3
  • 1.75e4
89.64
  • 89.64
  • 41.57
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
4.48e3
  • 4.48e3
  • 5.48e3
  • 8.33e3
  • 9.14e3
  • 9.36e3
  • 9.52e3
  • 1.28e4
  • 1.53e4
  • 1.91e4
  • 2.32e4
85.02
  • 85.02
  • 81.64
  • 72.10
  • 69.39
  • 68.65
  • 68.12
  • 57.07
  • 48.87
  • 36.15
  • 22.44
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
5.59e3
  • 5.59e3
81.29
  • 81.29
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
6.22e3
  • 6.22e3
  • 7.15e3
  • 1.07e4
  • 1.18e4
  • 1.29e4
  • 1.32e4
  • 1.33e4
  • 1.35e4
  • 1.41e4
  • 1.49e4
  • 1.50e4
  • 1.50e4
  • 1.50e4
79.16
  • 79.16
  • 76.05
  • 64.31
  • 60.63
  • 56.64
  • 55.86
  • 55.32
  • 54.66
  • 52.65
  • 50.10
  • 49.92
  • 49.80
  • 49.69
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000019Gastrula:Shield
6.75e3
  • 6.75e3
  • 1.11e4
  • 1.22e4
  • 1.37e4
  • 1.58e4
77.39
  • 77.39
  • 62.76
  • 59.20
  • 54.03
  • 47.22
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
9.40e3
  • 9.40e3
68.54
  • 68.54
AEIR
  • AEIR
UBERON:0003084heart primordium
  • ZFS:0000024Segmentation:5-9 somites
1.12e4
  • 1.12e4
62.50
  • 62.50
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.19e4
  • 1.19e4
60.13
  • 60.13
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.48e4
  • 1.48e4
50.44
  • 50.44
AEIR
  • AEIR
UBERON:0003081lateral plate mesoderm
  • ZFS:0000023Segmentation:1-4 somites
1.49e4
  • 1.49e4
49.99
  • 49.99
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
1.53e4
  • 1.53e4
  • 1.60e4
  • 1.90e4
48.84
  • 48.84
  • 46.58
  • 36.23
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.56e4
  • 1.56e4
47.78
  • 47.78
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.85e4
  • 1.85e4
38.06
  • 38.06
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.57e4
  • 2.57e4
13.91
  • 13.91
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EnsemblENSDARG00000021232 (nkx2.7)
ZFINZDB-GENE-990415-179 (nkx2.7)
EMBLBX004845, U66573
Uniprot/SPTREMBLQ98873, Q98873_DANRE

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