D. rerio Gene: pax4 - ENSDARG00000021336 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000021336
Namepax4
Descriptionpaired box 4 [Source:ZFIN;Acc:ZDB-GENE-041210-244]
OrganismDanio rerio (zebrafish)
Synonym(s)dkey-146j3.4, si:dkey-146j3.3

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreSources
CL:0000502type D enteroendocrine cell
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
7.40e3
  • 7.40e3
  • 9.86e3
AEIR
  • AEIR
  • AEIR
UBERON:0003923dorsal pancreatic bud
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
7.40e3
  • 7.40e3
  • 9.25e3
AEIR
  • AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000024Segmentation:5-9 somites
9.62e3
  • 9.62e3
AEIR
  • AEIR
UBERON:0003921pancreas primordium
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000027Segmentation:20-25 somites
1.14e4
  • 1.14e4
  • 1.23e4
  • 1.32e4
  • 1.48e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000171pancreatic A cell
  • ZFS:0000029Pharyngula:Prim-5
1.48e4
  • 1.48e4
AEIR
  • AEIR
CL:0005019pancreatic epsilon cell
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
1.48e4
  • 1.48e4
  • 1.48e4
AEIR
  • AEIR
  • AEIR
UBERON:0000930stomodeum
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000036Larval:Day 4
1.48e4
  • 1.48e4
  • 1.48e4
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.66e4
  • 1.66e4
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
2.03e4
  • 2.03e4
  • 2.10e4
  • 2.16e4
  • 2.30e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation
Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.
Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

EMBLBX897731
EnsemblENSDARG00000021336 (pax4)
Uniprot/SPTREMBLF1R840, F1R840_DANRE
ZFINZDB-GENE-041210-244 (pax4)

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