D. rerio Gene: zfp36l1b - ENSDARG00000021443 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000021443
Namezfp36l1b
Descriptionzinc finger protein 36, C3H type-like 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2391]
OrganismDanio rerio (zebrafish)
Synonym(s)fc06f10, wu:fc06f10, zfp36l1l, zgc:77882
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
598
  • 598
98.00
  • 98.00
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
733
  • 733
  • 1.08e3
97.55
  • 97.55
  • 96.40
AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
759
  • 759
97.46
  • 97.46
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
783
  • 783
97.38
  • 97.38
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
858
  • 858
97.13
  • 97.13
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
966
  • 966
96.77
  • 96.77
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.18e3
  • 1.18e3
96.06
  • 96.06
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.19e3
  • 1.19e3
96.04
  • 96.04
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.23e3
  • 1.23e3
95.88
  • 95.88
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
1.24e3
  • 1.24e3
  • 4.19e3
95.84
  • 95.84
  • 85.98
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.37e3
  • 1.37e3
  • 5.30e3
95.43
  • 95.43
  • 82.27
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.01e3
  • 2.01e3
93.28
  • 93.28
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
2.27e3
  • 2.27e3
92.40
  • 92.40
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
2.56e3
  • 2.56e3
91.43
  • 91.43
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
2.64e3
  • 2.64e3
  • 3.12e3
  • 4.26e3
  • 4.37e3
  • 5.13e3
  • 5.34e3
  • 5.53e3
  • 5.84e3
  • 7.05e3
  • 7.22e3
  • 7.95e3
  • 8.83e3
  • 9.49e3
  • 1.14e4
  • 1.41e4
  • 1.50e4
  • 1.50e4
91.17
  • 91.17
  • 89.54
  • 85.75
  • 85.37
  • 82.82
  • 82.13
  • 81.50
  • 80.45
  • 76.40
  • 75.83
  • 73.37
  • 70.45
  • 68.21
  • 61.75
  • 52.87
  • 49.92
  • 49.80
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
2.67e3
  • 2.67e3
  • 3.90e3
  • 5.05e3
  • 5.08e3
  • 5.77e3
  • 6.34e3
  • 7.44e3
  • 7.87e3
  • 8.37e3
  • 1.04e4
91.06
  • 91.06
  • 86.96
  • 83.08
  • 83.00
  • 80.67
  • 78.77
  • 75.08
  • 73.64
  • 71.96
  • 65.14
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
3.03e3
  • 3.03e3
89.85
  • 89.85
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
3.19e3
  • 3.19e3
89.33
  • 89.33
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
3.37e3
  • 3.37e3
  • 3.53e3
  • 3.86e3
88.73
  • 88.73
  • 88.20
  • 87.08
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0010170region of neural crest
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
4.48e3
  • 4.48e3
  • 8.71e3
  • 8.96e3
  • 8.96e3
85.00
  • 85.00
  • 70.82
  • 69.99
  • 69.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
5.39e3
  • 5.39e3
  • 8.04e3
  • 8.89e3
  • 1.04e4
81.94
  • 81.94
  • 73.10
  • 70.22
  • 65.21
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000104life cycle
5.50e3
  • 5.50e3
  • 8.25e3
  • 1.49e4
81.58
  • 81.58
  • 72.37
  • 49.94
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
5.75e3
  • 5.75e3
  • 5.83e3
  • 7.27e3
  • 8.75e3
  • 9.83e3
  • 1.16e4
80.74
  • 80.74
  • 80.47
  • 75.68
  • 70.69
  • 67.10
  • 61.16
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2000083ventral mesoderm
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
6.15e3
  • 6.15e3
  • 6.97e3
  • 6.97e3
  • 7.47e3
79.40
  • 79.40
  • 76.66
  • 76.66
  • 74.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002540lateral line system
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
6.22e3
  • 6.22e3
  • 6.22e3
  • 9.13e3
  • 9.13e3
  • 9.13e3
  • 9.60e3
  • 9.60e3
  • 1.07e4
79.16
  • 79.16
  • 79.16
  • 69.43
  • 69.43
  • 69.43
  • 67.85
  • 67.85
  • 64.28
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003053ventricular zone
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
6.89e3
  • 6.89e3
  • 7.47e3
  • 8.15e3
  • 8.71e3
  • 8.71e3
  • 8.96e3
  • 8.96e3
76.92
  • 76.92
  • 74.99
  • 72.72
  • 70.82
  • 70.82
  • 69.99
  • 69.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2001026supraorbital lateral line neuromast
  • ZFS:0000037Larval:Day 5
7.47e3
  • 7.47e3
75.00
  • 75.00
AEIR
  • AEIR
UBERON:2000136otic lateral line neuromast
  • ZFS:0000037Larval:Day 5
7.47e3
  • 7.47e3
75.00
  • 75.00
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
7.54e3
  • 7.54e3
74.76
  • 74.76
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
8.15e3
  • 8.15e3
  • 8.72e3
  • 9.28e3
  • 9.30e3
72.71
  • 72.71
  • 70.81
  • 68.94
  • 68.86
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
8.60e3
  • 8.60e3
71.21
  • 71.21
AEIR
  • AEIR
UBERON:0003075neural plate
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
8.65e3
  • 8.65e3
  • 8.65e3
  • 9.25e3
71.04
  • 71.04
  • 71.04
  • 69.03
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
8.77e3
  • 8.77e3
70.62
  • 70.62
AEIR
  • AEIR
UBERON:2000814opercular lateral line neuromast
  • ZFS:0000037Larval:Day 5
8.96e3
  • 8.96e3
70.00
  • 70.00
AEIR
  • AEIR
UBERON:2001025occipital lateral line neuromast
  • ZFS:0000037Larval:Day 5
8.96e3
  • 8.96e3
70.00
  • 70.00
AEIR
  • AEIR
UBERON:0001891midbrain
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
8.96e3
  • 8.96e3
  • 9.60e3
69.99
  • 69.99
  • 67.85
AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
9.12e3
  • 9.12e3
69.46
  • 69.46
AEIR
  • AEIR
UBERON:0001890forebrain
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
9.19e3
  • 9.19e3
  • 9.67e3
  • 9.67e3
  • 9.96e3
  • 1.03e4
69.22
  • 69.22
  • 67.63
  • 67.63
  • 66.65
  • 65.37
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001003skin epidermis
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
9.67e3
  • 9.67e3
  • 9.71e3
  • 9.71e3
  • 9.96e3
  • 1.03e4
67.63
  • 67.63
  • 67.48
  • 67.48
  • 66.65
  • 65.61
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2000125mandibular lateral line neuromast
  • ZFS:0000037Larval:Day 5
9.96e3
  • 9.96e3
66.66
  • 66.66
AEIR
  • AEIR
UBERON:2000813infraorbital lateral line neuromast
  • ZFS:0000037Larval:Day 5
9.96e3
  • 9.96e3
66.66
  • 66.66
AEIR
  • AEIR
UBERON:2000939middle lateral line neuromast
  • ZFS:0000037Larval:Day 5
9.96e3
  • 9.96e3
66.66
  • 66.66
AEIR
  • AEIR
UBERON:2000940posterior lateral line neuromast
  • ZFS:0000037Larval:Day 5
9.96e3
  • 9.96e3
66.66
  • 66.66
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
65.07
  • 65.07
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
1.37e4
  • 1.37e4
  • 1.52e4
  • 1.80e4
54.05
  • 54.05
  • 49.02
  • 39.59
AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Vertebrata1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000021443.

Cross-references

EnsemblENSDARG00000021443 (zfp36l1b)
ZFINZDB-GENE-030131-2391 (zfp36l1b)
EMBLBC063991, BX649319
Uniprot/SPTREMBLQ6P3H0, Q6P3H0_DANRE

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