D. rerio Gene: vrk2 - ENSDARG00000021547 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000021547
Namevrk2
Descriptionvaccinia related kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1046]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:56483

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
3.32e3
  • 3.32e3
88.88
  • 88.88
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
3.73e3
  • 3.73e3
87.52
  • 87.52
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
4.33e3
  • 4.33e3
85.50
  • 85.50
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
5.17e3
  • 5.17e3
82.68
  • 82.68
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
5.26e3
  • 5.26e3
82.39
  • 82.39
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
6.33e3
  • 6.33e3
78.82
  • 78.82
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
6.37e3
  • 6.37e3
78.66
  • 78.66
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000016Blastula:30%-epiboly
6.47e3
  • 6.47e3
  • 8.57e3
  • 1.10e4
  • 1.11e4
  • 1.25e4
78.34
  • 78.34
  • 71.29
  • 63.03
  • 62.84
  • 58.11
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
6.99e3
  • 6.99e3
  • 9.82e3
  • 1.16e4
76.58
  • 76.58
  • 67.13
  • 61.08
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
7.15e3
  • 7.15e3
76.07
  • 76.07
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
7.53e3
  • 7.53e3
74.78
  • 74.78
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
7.70e3
  • 7.70e3
74.22
  • 74.22
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
7.70e3
  • 7.70e3
74.21
  • 74.21
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
8.49e3
  • 8.49e3
  • 1.31e4
71.58
  • 71.58
  • 56.09
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
8.56e3
  • 8.56e3
  • 1.18e4
71.35
  • 71.35
  • 60.57
AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
8.60e3
  • 8.60e3
  • 1.20e4
71.20
  • 71.20
  • 59.78
AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
9.11e3
  • 9.11e3
69.49
  • 69.49
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0000066fully formed stage
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0000104life cycle
  • ZFS:0000036Larval:Day 4
9.35e3
  • 9.35e3
  • 1.24e4
  • 1.31e4
  • 1.32e4
  • 1.34e4
  • 1.36e4
  • 1.36e4
  • 1.36e4
  • 1.38e4
  • 1.39e4
  • 1.42e4
  • 1.44e4
  • 1.46e4
  • 1.50e4
  • 1.50e4
  • 1.53e4
68.70
  • 68.70
  • 58.33
  • 56.16
  • 55.91
  • 55.13
  • 54.52
  • 54.50
  • 54.32
  • 53.79
  • 53.31
  • 52.43
  • 51.74
  • 51.24
  • 49.93
  • 49.92
  • 48.83
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.00e4
  • 1.00e4
66.44
  • 66.44
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.02e4
  • 1.02e4
65.96
  • 65.96
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
1.07e4
  • 1.07e4
  • 1.26e4
  • 1.35e4
  • 1.35e4
  • 1.43e4
64.09
  • 64.09
  • 57.70
  • 54.72
  • 54.67
  • 52.07
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
1.12e4
  • 1.12e4
  • 1.14e4
  • 1.24e4
  • 1.26e4
  • 1.28e4
  • 1.30e4
  • 1.34e4
  • 1.38e4
  • 1.43e4
  • 1.46e4
62.50
  • 62.50
  • 61.90
  • 58.56
  • 57.77
  • 57.08
  • 56.32
  • 55.20
  • 53.63
  • 52.24
  • 51.08
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.19e4
  • 1.19e4
60.32
  • 60.32
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.24e4
  • 1.24e4
58.44
  • 58.44
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.26e4
  • 1.26e4
57.72
  • 57.72
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.38e4
  • 1.38e4
  • 1.50e4
53.78
  • 53.78
  • 49.87
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
1.47e4
  • 1.47e4
  • 1.53e4
  • 1.58e4
50.74
  • 50.74
  • 48.93
  • 47.19
AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EnsemblENSDARG00000021547 (vrk2)
ZFINZDB-GENE-040426-1046 (vrk2)
EMBLCR354594
Uniprot/SPTREMBLB8JHS7, B8JHS7_DANRE, F1Q770, F1Q770_DANRE

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