D. rerio Gene: tmem60 - ENSDARG00000021589 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000021589
Nametmem60
Descriptiontransmembrane protein 60 [Source:ZFIN;Acc:ZDB-GENE-040801-222]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:91811

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
2.82e3
  • 2.82e3
90.57
  • 90.57
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
5.81e3
  • 5.81e3
80.53
  • 80.53
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
5.95e3
  • 5.95e3
80.08
  • 80.08
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
6.34e3
  • 6.34e3
78.78
  • 78.78
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
6.40e3
  • 6.40e3
78.57
  • 78.57
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
6.43e3
  • 6.43e3
78.48
  • 78.48
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
6.56e3
  • 6.56e3
78.04
  • 78.04
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
6.57e3
  • 6.57e3
78.00
  • 78.00
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
6.92e3
  • 6.92e3
  • 9.00e3
76.84
  • 76.84
  • 69.86
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
6.98e3
  • 6.98e3
76.64
  • 76.64
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
7.43e3
  • 7.43e3
  • 1.31e4
75.12
  • 75.12
  • 56.18
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
8.39e3
  • 8.39e3
71.92
  • 71.92
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
8.65e3
  • 8.65e3
  • 9.37e3
71.03
  • 71.03
  • 68.64
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
8.66e3
  • 8.66e3
71.01
  • 71.01
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
8.70e3
  • 8.70e3
70.88
  • 70.88
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
9.11e3
  • 9.11e3
  • 9.36e3
  • 9.46e3
  • 1.12e4
  • 1.25e4
69.49
  • 69.49
  • 68.68
  • 68.33
  • 62.53
  • 58.01
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
9.11e3
  • 9.11e3
69.49
  • 69.49
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
9.17e3
  • 9.17e3
  • 9.60e3
69.31
  • 69.31
  • 67.85
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
9.40e3
  • 9.40e3
68.51
  • 68.51
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
9.76e3
  • 9.76e3
  • 1.01e4
67.32
  • 67.32
  • 66.16
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.07e4
  • 1.07e4
64.26
  • 64.26
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.07e4
  • 1.07e4
64.12
  • 64.12
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.10e4
  • 1.10e4
63.23
  • 63.23
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.11e4
  • 1.11e4
62.74
  • 62.74
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.11e4
  • 1.11e4
62.71
  • 62.71
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
1.34e4
  • 1.34e4
55.16
  • 55.16
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
1.44e4
  • 1.44e4
51.79
  • 51.79
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000040Larval:Days 14-20
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
1.45e4
  • 1.45e4
  • 1.49e4
  • 1.49e4
51.57
  • 51.57
  • 50.25
  • 50.20
AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EnsemblENSDARG00000021589 (tmem60)
ZFINZDB-GENE-040801-222 (tmem60)
EMBLCR384055
Uniprot/SPTREMBLE9QBF5, E9QBF5_DANRE

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