D. rerio Gene: lhfpl3 - ENSDARG00000021595 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000021595
Namelhfpl3
Descriptionlipoma HMGIC fusion partner-like 3 [Source:ZFIN;Acc:ZDB-GENE-040801-180]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:92534

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.08e3
  • 1.08e3
  • 4.09e3
96.33630
  • 96.33630
  • 86.17613
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
1.27e3
  • 1.27e3
  • 9.82e3
95.70632
  • 95.70632
  • 66.80154
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
2.39e3
  • 2.39e3
  • 5.73e3
  • 6.24e3
  • 9.30e3
  • 1.02e4
  • 1.02e4
  • 1.54e4
  • 1.77e4
91.91236
  • 91.91236
  • 80.64185
  • 78.91449
  • 68.57766
  • 65.61566
  • 65.60979
  • 47.85865
  • 40.05343
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000030Pharyngula:Prim-15
2.47e3
  • 2.47e3
  • 6.75e3
  • 1.06e4
  • 1.47e4
  • 1.62e4
  • 1.76e4
  • 1.77e4
  • 1.80e4
91.63970
  • 91.63970
  • 77.17783
  • 64.20232
  • 50.41996
  • 45.35847
  • 40.64185
  • 40.27188
  • 39.14302
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
2.90e3
  • 2.90e3
  • 7.04e3
90.20132
  • 90.20132
  • 76.21693
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
3.76e3
  • 3.76e3
  • 4.11e3
  • 4.70e3
87.28640
  • 87.28640
  • 86.10444
  • 84.13016
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001017central nervous system
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
8.46e3
  • 8.46e3
  • 8.57e3
  • 8.71e3
  • 8.71e3
  • 8.88e3
  • 1.02e4
  • 1.06e4
  • 1.11e4
71.41842
  • 71.41842
  • 71.03743
  • 70.57472
  • 70.57472
  • 69.98817
  • 65.37279
  • 64.27218
  • 62.49323
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.01e4
  • 1.01e4
66.02843
  • 66.02843
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.07e4
  • 1.07e4
63.98303
  • 63.98303
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.33e4
  • 1.33e4
55.03956
  • 55.03956
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.60e4
  • 1.60e4
45.94154
  • 45.94154
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.71e4
  • 1.71e4
42.07956
  • 42.07956
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.93e4
  • 1.93e4
34.81486
  • 34.81486
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.06e4
  • 2.06e4
30.25197
  • 30.25197
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLBC076060, BX537162
EnsemblENSDARG00000021595 (lhfpl3)
Uniprot/SWISSPROTLHPL3_DANRE, Q6DHB5
ZFINZDB-GENE-040801-180 (lhfpl3)

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