D. rerio Gene: sh3bgr - ENSDARG00000021633 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000021633
Namesh3bgr
DescriptionSH3 domain binding glutamate-rich protein [Source:ZFIN;Acc:ZDB-GENE-040801-27]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:100896
Orthologs(s)6 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
349
  • 349
98.83
  • 98.83
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
388
  • 388
98.70
  • 98.70
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
781
  • 781
97.39
  • 97.39
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
1.75e3
  • 1.75e3
  • 1.80e3
  • 2.03e3
  • 3.24e3
  • 5.40e3
  • 8.53e3
  • 9.74e3
  • 1.11e4
  • 1.16e4
  • 1.22e4
94.16
  • 94.16
  • 93.99
  • 93.19
  • 89.15
  • 81.92
  • 71.45
  • 67.38
  • 62.93
  • 61.03
  • 59.32
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.75e3
  • 1.75e3
  • 2.02e3
94.15
  • 94.15
  • 93.23
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000036Larval:Day 4
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:00072368 cell stage
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000106zygote stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • UBERON:0000068embryo stage
  • UBERON:0000066fully formed stage
  • ZFS:0000049segmentation
1.87e3
  • 1.87e3
  • 3.37e3
  • 4.56e3
  • 6.39e3
  • 6.79e3
  • 7.91e3
  • 8.33e3
  • 8.85e3
  • 1.09e4
  • 1.26e4
  • 1.27e4
  • 1.27e4
  • 1.29e4
  • 1.29e4
  • 1.30e4
  • 1.32e4
  • 1.39e4
  • 1.49e4
  • 1.49e4
93.74
  • 93.74
  • 88.71
  • 84.75
  • 78.59
  • 77.27
  • 73.52
  • 72.10
  • 70.36
  • 63.58
  • 57.66
  • 57.61
  • 57.35
  • 56.86
  • 56.66
  • 56.57
  • 55.74
  • 53.44
  • 50.25
  • 49.95
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
2.11e3
  • 2.11e3
  • 1.22e4
92.93
  • 92.93
  • 59.15
AEIR
  • AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
2.11e3
  • 2.11e3
92.92
  • 92.92
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
2.54e3
  • 2.54e3
  • 3.99e3
  • 5.40e3
91.48
  • 91.48
  • 86.64
  • 81.94
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
3.16e3
  • 3.16e3
89.42
  • 89.42
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
5.25e3
  • 5.25e3
82.43
  • 82.43
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
5.98e3
  • 5.98e3
79.99
  • 79.99
AEIR
  • AEIR
UBERON:0003082myotome
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000033Hatching:Long-pec
7.47e3
  • 7.47e3
  • 1.34e4
75.00
  • 75.00
  • 54.97
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
8.26e3
  • 8.26e3
72.35
  • 72.35
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
8.26e3
  • 8.26e3
72.34
  • 72.34
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
8.41e3
  • 8.41e3
  • 1.38e4
71.83
  • 71.83
  • 53.78
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
8.96e3
  • 8.96e3
  • 1.02e4
  • 1.07e4
70.01
  • 70.01
  • 65.93
  • 64.16
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
9.73e3
  • 9.73e3
67.41
  • 67.41
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
9.92e3
  • 9.92e3
66.78
  • 66.78
AEIR
  • AEIR
UBERON:0000151pectoral fin
  • ZFS:0000036Larval:Day 4
  • ZFS:0000035Larval:Protruding-mouth
9.96e3
  • 9.96e3
  • 1.28e4
66.67
  • 66.67
  • 57.14
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
9.96e3
  • 9.96e3
  • 1.12e4
  • 1.79e4
66.67
  • 66.67
  • 62.50
  • 40.22
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0008904neuromast
  • ZFS:0000036Larval:Day 4
  • ZFS:0000035Larval:Protruding-mouth
9.96e3
  • 9.96e3
  • 1.28e4
66.67
  • 66.67
  • 57.14
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000022Gastrula:Bud
9.96e3
  • 9.96e3
  • 1.02e4
  • 1.06e4
  • 1.08e4
  • 1.13e4
  • 1.29e4
66.66
  • 66.66
  • 65.71
  • 64.47
  • 63.84
  • 62.32
  • 56.82
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000011Blastula:1k-cell
9.97e3
  • 9.97e3
  • 1.02e4
  • 1.05e4
  • 1.10e4
  • 1.27e4
66.63
  • 66.63
  • 65.93
  • 64.96
  • 63.27
  • 57.34
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.00e4
  • 1.00e4
66.36
  • 66.36
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
1.07e4
  • 1.07e4
  • 1.11e4
64.25
  • 64.25
  • 62.99
AEIR
  • AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000036Larval:Day 4
1.12e4
  • 1.12e4
  • 1.12e4
62.50
  • 62.50
  • 62.50
AEIR
  • AEIR
  • AEIR
UBERON:0015178somite border
  • ZFS:0000029Pharyngula:Prim-5
1.12e4
  • 1.12e4
62.50
  • 62.50
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.14e4
  • 1.14e4
61.75
  • 61.75
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.15e4
  • 1.15e4
61.34
  • 61.34
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.16e4
  • 1.16e4
61.00
  • 61.00
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.23e4
  • 1.23e4
58.76
  • 58.76
AEIR
  • AEIR
UBERON:0001017central nervous system
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
1.28e4
  • 1.28e4
  • 1.34e4
57.13
  • 57.13
  • 55.24
AEIR
  • AEIR
  • AEIR
UBERON:0003051ear vesicle
  • ZFS:0000029Pharyngula:Prim-5
1.35e4
  • 1.35e4
54.96
  • 54.96
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.46e4
  • 1.46e4
51.06
  • 51.06
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • UBERON:0000066fully formed stage
1.50e4
  • 1.50e4
49.94
  • 49.94
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.53e4
  • 1.53e4
48.84
  • 48.84
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.76e4
  • 1.76e4
41.12
  • 41.12
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.99e4
  • 1.99e4
33.51
  • 33.51
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Orthology information comes from OMA : ENSDARG00000021633.

Cross-references

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