D. rerio Gene: upk1a - ENSDARG00000021866 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000021866
Nameupk1a
Descriptionuroplakin 1a [Source:ZFIN;Acc:ZDB-GENE-060421-2603]
OrganismDanio rerio (zebrafish)
Synonym(s)fb14a02, fk84c04, wu:fb14a02, wu:fk84c04, zgc:136832

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
647
  • 647
97.81600
  • 97.81600
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
2.18e3
  • 2.18e3
92.63177
  • 92.63177
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
3.34e3
  • 3.34e3
88.70655
  • 88.70655
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
9.81e3
  • 9.81e3
66.85651
  • 66.85651
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.16e4
  • 1.16e4
60.77265
  • 60.77265
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000042Juvenile:Days 30-44
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
1.39e4
  • 1.39e4
  • 1.42e4
  • 1.46e4
52.89909
  • 52.89909
  • 51.88136
  • 50.68197
AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EMBLAL844567, BC115285
EnsemblENSDARG00000021866 (upk1a)
Uniprot/SPTREMBLQ1RLU3, Q1RLU3_DANRE
ZFINZDB-GENE-060421-2603 (upk1a)

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