D. rerio Gene: fbxl3b - ENSDARG00000021882 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000021882
Namefbxl3b
DescriptionF-box and leucine-rich repeat protein 3b [Source:ZFIN;Acc:ZDB-GENE-041010-178]
OrganismDanio rerio (zebrafish)
Synonym(s)wu:fd52d09, zgc:101682
Orthologs(s)18 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.77e3
  • 1.77e3
94.09
  • 94.09
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
2.02e3
  • 2.02e3
93.24
  • 93.24
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
2.07e3
  • 2.07e3
  • 7.22e3
93.07
  • 93.07
  • 75.81
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
2.19e3
  • 2.19e3
  • 5.97e3
92.68
  • 92.68
  • 80.02
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
2.61e3
  • 2.61e3
91.28
  • 91.28
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
3.11e3
  • 3.11e3
89.59
  • 89.59
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
3.14e3
  • 3.14e3
89.50
  • 89.50
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
3.29e3
  • 3.29e3
89.00
  • 89.00
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
3.29e3
  • 3.29e3
89.00
  • 89.00
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
3.41e3
  • 3.41e3
88.59
  • 88.59
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
3.56e3
  • 3.56e3
88.10
  • 88.10
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
3.56e3
  • 3.56e3
88.07
  • 88.07
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
3.90e3
  • 3.90e3
  • 5.15e3
  • 5.58e3
  • 5.89e3
  • 1.18e4
  • 1.22e4
  • 1.41e4
  • 1.44e4
  • 1.50e4
86.95
  • 86.95
  • 82.75
  • 81.31
  • 80.27
  • 60.45
  • 59.18
  • 52.75
  • 51.90
  • 49.65
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
4.50e3
  • 4.50e3
84.94
  • 84.94
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
5.24e3
  • 5.24e3
82.47
  • 82.47
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
5.81e3
  • 5.81e3
  • 1.18e4
  • 1.56e4
80.54
  • 80.54
  • 60.50
  • 47.88
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
6.00e3
  • 6.00e3
  • 1.63e4
79.92
  • 79.92
  • 45.41
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
  • ZFS:0000020Gastrula:75%-epiboly
6.14e3
  • 6.14e3
  • 6.34e3
  • 1.00e4
  • 1.18e4
79.44
  • 79.44
  • 78.77
  • 66.48
  • 60.56
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
6.39e3
  • 6.39e3
78.62
  • 78.62
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
7.44e3
  • 7.44e3
75.11
  • 75.11
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
7.60e3
  • 7.60e3
74.54
  • 74.54
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
9.68e3
  • 9.68e3
67.59
  • 67.59
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.05e4
  • 1.05e4
64.97
  • 64.97
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
1.05e4
  • 1.05e4
  • 1.20e4
  • 1.31e4
64.78
  • 64.78
  • 59.77
  • 56.18
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
1.18e4
  • 1.18e4
  • 1.20e4
  • 1.27e4
  • 1.28e4
  • 1.28e4
  • 1.33e4
  • 1.39e4
  • 1.40e4
  • 1.45e4
  • 1.46e4
  • 1.47e4
60.49
  • 60.49
  • 59.82
  • 57.40
  • 57.25
  • 57.09
  • 55.31
  • 53.54
  • 53.03
  • 51.60
  • 50.98
  • 50.88
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.23e4
  • 1.23e4
58.86
  • 58.86
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.59e4
  • 1.59e4
46.61
  • 46.61
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Otophysi1 geneCompare expression
Vertebrata2 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000021882.

Cross-references

EnsemblENSDARG00000021882 (fbxl3b)
ZFINZDB-GENE-041010-178 (fbxl3b)
EMBLCABZ01102024, CABZ01102025
Uniprot/SPTREMBLF1QN30, F1QN30_DANRE

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