D. rerio Gene: VSTM2A - ENSDARG00000021909 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000021909
NameVSTM2A
Descriptionzgc:110852 [Source:ZFIN;Acc:ZDB-GENE-050306-31]
OrganismDanio rerio (zebrafish)
Synonym(s)mgc33530, vstm2

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
1.81e3
  • 1.81e3
93.96
  • 93.96
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.20e4
  • 1.20e4
59.77
  • 59.77
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.34e4
  • 1.34e4
  • 1.89e4
55.18
  • 55.18
  • 36.67
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.37e4
  • 1.37e4
54.11
  • 54.11
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.37e4
  • 1.37e4
  • 1.50e4
54.02
  • 54.02
  • 49.84
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.58e4
  • 1.58e4
47.20
  • 47.20
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.60e4
  • 1.60e4
46.36
  • 46.36
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
1.63e4
  • 1.63e4
  • 1.65e4
  • 2.31e4
45.56
  • 45.56
  • 44.90
  • 22.74
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.85e4
  • 1.85e4
  • 2.45e4
38.13
  • 38.13
  • 17.92
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.05e4
  • 2.05e4
31.39
  • 31.39
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.14e4
  • 2.14e4
28.23
  • 28.23
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
2.15e4
  • 2.15e4
28.13
  • 28.13
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.25e4
  • 2.25e4
24.57
  • 24.57
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.55e4
  • 2.55e4
14.66
  • 14.66
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSDARG00000021909 (VSTM2A)
HGNCHGNC:28499 (VSTM2A)
ZFINZDB-GENE-050306-31 (zgc:110852)
Uniprot/SPTREMBLF1QRB3, F1QRB3_DANRE

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