D. rerio Gene: gtf2ird1 - ENSDARG00000022203 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000022203
Namegtf2ird1
DescriptionGTF2I repeat domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-010328-18]
OrganismDanio rerio (zebrafish)
Synonym(s)si:dkey-32e10.2, si:dkey-32e10.4-001

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreSources
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
5.14e3
  • 5.14e3
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
7.66e3
  • 7.66e3
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
7.94e3
  • 7.94e3
  • 8.05e3
  • 9.16e3
  • 1.12e4
  • 1.19e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
8.34e3
  • 8.34e3
  • 1.18e4
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
9.06e3
  • 9.06e3
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.09e4
  • 1.09e4
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.14e4
  • 1.14e4
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.14e4
  • 1.14e4
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.15e4
  • 1.15e4
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.28e4
  • 1.28e4
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.29e4
  • 1.29e4
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.30e4
  • 1.30e4
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.42e4
  • 1.42e4
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.49e4
  • 1.49e4
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.50e4
  • 1.50e4
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.55e4
  • 1.55e4
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.80e4
  • 1.80e4
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation
Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.
Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLBX901917
EnsemblENSDARG00000022203 (gtf2ird1)
Uniprot/SPTREMBLE7F1R4, E7F1R4_DANRE, F8W502, F8W502_DANRE
ZFINZDB-GENE-010328-18 (gtf2ird1)

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