D. rerio Gene: pdzk1 - ENSDARG00000022261 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000022261
Namepdzk1
DescriptionPDZ domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-031222-1]
OrganismDanio rerio (zebrafish)
Synonym(s)cb1074, pdzk1, pdzk1l, wu:fa55e12, wu:fb65e01

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreSources
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
379
  • 379
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
395
  • 395
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
445
  • 445
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.34e3
  • 1.34e3
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
2.14e3
  • 2.14e3
  • 1.15e4
  • 1.23e4
  • 1.27e4
  • 1.53e4
  • 1.62e4
  • 1.74e4
  • 1.77e4
  • 1.77e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.58e3
  • 2.58e3
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
5.45e3
  • 5.45e3
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000037Larval:Day 5
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
6.81e3
  • 6.81e3
  • 8.43e3
  • 1.06e4
  • 1.13e4
  • 1.21e4
  • 1.45e4
  • 1.67e4
  • 1.76e4
  • 1.76e4
  • 1.77e4
  • 1.77e4
  • 1.78e4
  • 1.80e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
7.99e3
  • 7.99e3
  • 1.55e4
AEIR
  • AEIR
  • AEIR
UBERON:0003060pronephric duct
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000037Larval:Day 5
9.58e3
  • 9.58e3
  • 1.02e4
  • 1.04e4
  • 1.04e4
  • 1.07e4
  • 1.11e4
  • 1.11e4
  • 1.25e4
  • 1.48e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001555digestive tract
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
  • UBERON:0000066fully formed stage
1.02e4
  • 1.02e4
  • 1.06e4
  • 1.41e4
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
1.13e4
  • 1.13e4
  • 1.14e4
  • 1.27e4
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2001076intestinal bulb
  • ZFS:0000037Larval:Day 5
1.18e4
  • 1.18e4
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.25e4
  • 1.25e4
AEIR
  • AEIR
UBERON:0009622pronephric proximal straight tubule
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
1.27e4
  • 1.27e4
  • 1.48e4
AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.37e4
  • 1.37e4
AEIR
  • AEIR
UBERON:0007298pronephric proximal convoluted tubule
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
1.48e4
  • 1.48e4
  • 1.48e4
AEIR
  • AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.59e4
  • 1.59e4
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
1.77e4
  • 1.77e4
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
2.09e4
  • 2.09e4
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.37e4
  • 2.37e4
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation
Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.
Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLCU695204, CU914786
EnsemblENSDARG00000022261 (pdzk1)
Uniprot/SPTREMBLF1QTX0, F1QTX0_DANRE
ZFINZDB-GENE-031222-1 (pdzk1)

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