D. rerio Gene: hnf1bb - ENSDARG00000022295 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000022295
Namehnf1bb
DescriptionHNF1 homeobox Bb [Source:ZFIN;Acc:ZDB-GENE-030131-3003]
OrganismDanio rerio (zebrafish)
Synonym(s)hnf1bl, hnf1bl,gn hnf1g, hnf1g, hnf1gamma, wu:fc23f06

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.14e3
  • 1.14e3
96.20
  • 96.20
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.92e3
  • 1.92e3
93.57
  • 93.57
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
5.92e3
  • 5.92e3
80.19
  • 80.19
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
5.92e3
  • 5.92e3
80.17
  • 80.17
AEIR
  • AEIR
UBERON:0003064intermediate mesoderm
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000025Segmentation:10-13 somites
7.47e3
  • 7.47e3
  • 1.49e4
75.00
  • 75.00
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
7.75e3
  • 7.75e3
  • 7.82e3
  • 1.16e4
  • 1.36e4
  • 1.39e4
  • 1.44e4
  • 1.56e4
  • 1.60e4
  • 1.68e4
  • 1.69e4
74.06
  • 74.06
  • 73.82
  • 61.23
  • 54.45
  • 53.49
  • 51.91
  • 47.91
  • 46.36
  • 43.86
  • 43.49
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
8.12e3
  • 8.12e3
72.82
  • 72.82
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
8.45e3
  • 8.45e3
71.70
  • 71.70
AEIR
  • AEIR
UBERON:0005515rhombomere 5
  • ZFS:0000025Segmentation:10-13 somites
8.53e3
  • 8.53e3
71.43
  • 71.43
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
9.16e3
  • 9.16e3
69.34
  • 69.34
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000040Larval:Days 14-20
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000022Gastrula:Bud
1.02e4
  • 1.02e4
  • 1.07e4
  • 1.29e4
  • 1.47e4
  • 1.49e4
  • 1.53e4
  • 1.53e4
  • 1.58e4
  • 1.59e4
  • 1.60e4
  • 1.63e4
  • 1.66e4
65.83
  • 65.83
  • 64.25
  • 56.94
  • 50.90
  • 50.20
  • 48.92
  • 48.77
  • 47.18
  • 46.61
  • 46.34
  • 45.54
  • 44.35
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003060pronephric duct
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000026Segmentation:14-19 somites
1.05e4
  • 1.05e4
  • 1.10e4
  • 1.41e4
64.98
  • 64.98
  • 63.14
  • 52.75
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009622pronephric proximal straight tubule
  • ZFS:0000028Segmentation:26+ somites
1.12e4
  • 1.12e4
62.50
  • 62.50
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.20e4
  • 1.20e4
59.93
  • 59.93
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.26e4
  • 1.26e4
57.96
  • 57.96
AEIR
  • AEIR
UBERON:0005721pronephric mesoderm
  • ZFS:0000023Segmentation:1-4 somites
1.33e4
  • 1.33e4
55.55
  • 55.55
AEIR
  • AEIR
UBERON:0002120pronephros
  • ZFS:0000029Pharyngula:Prim-5
1.34e4
  • 1.34e4
54.99
  • 54.99
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.41e4
  • 1.41e4
52.86
  • 52.86
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.42e4
  • 1.42e4
  • 1.57e4
  • 1.86e4
52.38
  • 52.38
  • 47.44
  • 37.56
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007308pronephric distal early tubule
  • ZFS:0000028Segmentation:26+ somites
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
1.52e4
  • 1.52e4
  • 1.61e4
  • 1.74e4
49.25
  • 49.25
  • 46.03
  • 41.75
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.52e4
  • 1.52e4
49.21
  • 49.21
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.53e4
  • 1.53e4
48.89
  • 48.89
AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • ZFS:0000022Gastrula:Bud
1.75e4
  • 1.75e4
  • 2.11e4
41.42
  • 41.42
  • 29.48
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
1.80e4
  • 1.80e4
39.61
  • 39.61
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.96e4
  • 1.96e4
  • 2.35e4
34.29
  • 34.29
  • 21.45
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
2.01e4
  • 2.01e4
32.54
  • 32.54
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.17e4
  • 2.17e4
27.35
  • 27.35
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EnsemblENSDARG00000022295 (hnf1bb)
ZFINZDB-GENE-030131-3003 (hnf1bb)
EMBLAF250352, CU694492
Uniprot/SPTREMBLF8W5H7, F8W5H7_DANRE, G1K2J6, G1K2J6_DANRE
Uniprot/SWISSPROTHN1BB_DANRE, Q8UW00

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