D. rerio Gene: dspa - ENSDARG00000022309 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000022309
Namedspa
Descriptiondesmoplakin a [Source:ZFIN;Acc:ZDB-GENE-030131-2743]
OrganismDanio rerio (zebrafish)
Synonym(s)im:6911953, sb:cb570, wu:fc17a08, wu:fk73d01

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
373
  • 373
  • 1.73e3
98.74327
  • 98.74327
  • 94.17016
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
506
  • 506
98.29165
  • 98.29165
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
511
  • 511
  • 1.30e4
98.27624
  • 98.27624
  • 56.00305
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
679
  • 679
97.70841
  • 97.70841
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000109gastrula stage
970
  • 970
  • 972
  • 1.27e3
  • 1.36e3
  • 4.89e3
96.72334
  • 96.72334
  • 96.71739
  • 95.70368
  • 95.39621
  • 83.48683
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.55e3
  • 1.55e3
94.76112
  • 94.76112
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
  • ZFS:0000030Pharyngula:Prim-15
1.73e3
  • 1.73e3
  • 2.38e3
  • 2.72e3
  • 2.93e3
  • 3.14e3
  • 3.35e3
  • 5.19e3
  • 5.71e3
  • 6.15e3
  • 9.94e3
94.15669
  • 94.15669
  • 91.94369
  • 90.79648
  • 90.10697
  • 89.39837
  • 88.67472
  • 82.45280
  • 80.71337
  • 79.22471
  • 66.39356
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000036Larval:Day 4
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
2.26e3
  • 2.26e3
  • 2.43e3
  • 2.64e3
  • 3.09e3
  • 4.48e3
  • 4.69e3
  • 4.98e3
  • 4.99e3
  • 5.47e3
  • 5.76e3
  • 5.99e3
  • 6.20e3
  • 1.17e4
92.35042
  • 92.35042
  • 91.80462
  • 91.08809
  • 89.57154
  • 84.86659
  • 84.16375
  • 83.17483
  • 83.13535
  • 81.51316
  • 80.53367
  • 79.76265
  • 79.05791
  • 60.41005
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
2.30e3
  • 2.30e3
92.23632
  • 92.23632
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
3.64e3
  • 3.64e3
87.71737
  • 87.71737
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
3.77e3
  • 3.77e3
  • 5.08e3
  • 6.36e3
87.25899
  • 87.25899
  • 82.84261
  • 78.51561
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
3.84e3
  • 3.84e3
87.02449
  • 87.02449
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
4.02e3
  • 4.02e3
86.42278
  • 86.42278
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
4.62e3
  • 4.62e3
84.37392
  • 84.37392
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
4.72e3
  • 4.72e3
  • 1.35e4
84.06632
  • 84.06632
  • 54.33512
AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
5.50e3
  • 5.50e3
81.42619
  • 81.42619
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
5.68e3
  • 5.68e3
80.80543
  • 80.80543
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
6.03e3
  • 6.03e3
79.63936
  • 79.63936
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
6.28e3
  • 6.28e3
78.79100
  • 78.79100
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
7.84e3
  • 7.84e3
73.49432
  • 73.49432
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
8.02e3
  • 8.02e3
72.90722
  • 72.90722
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000016Blastula:30%-epiboly
8.22e3
  • 8.22e3
72.20479
  • 72.20479
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.00e4
  • 1.00e4
66.12208
  • 66.12208
AEIR
  • AEIR
UBERON:0001042chordate pharynx
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
1.04e4
  • 1.04e4
  • 1.07e4
  • 1.25e4
  • 1.25e4
64.97970
  • 64.97970
  • 63.87031
  • 57.67708
  • 57.67708
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003051ear vesicle
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000028Segmentation:26+ somites
1.04e4
  • 1.04e4
  • 1.08e4
  • 1.22e4
  • 1.28e4
  • 1.34e4
64.97970
  • 64.97970
  • 63.61269
  • 58.66693
  • 56.62610
  • 54.73317
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000004nose
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
1.04e4
  • 1.04e4
  • 1.04e4
64.68900
  • 64.68900
  • 64.68900
AEIR
  • AEIR
  • AEIR
UBERON:0003055periderm
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
1.06e4
  • 1.06e4
  • 1.06e4
  • 1.06e4
  • 1.06e4
  • 1.06e4
  • 1.06e4
  • 1.11e4
  • 1.18e4
  • 1.18e4
  • 1.23e4
  • 1.39e4
  • 1.48e4
  • 1.48e4
64.28063
  • 64.28063
  • 64.28063
  • 64.28063
  • 64.28063
  • 64.28063
  • 64.28063
  • 62.48309
  • 59.98310
  • 59.98310
  • 58.31136
  • 52.91751
  • 49.97803
  • 49.97803
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.06e4
  • 1.06e4
64.19345
  • 64.19345
AEIR
  • AEIR
UBERON:0007383enveloping layer of ectoderm
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
1.08e4
  • 1.08e4
  • 1.08e4
  • 1.11e4
  • 1.18e4
  • 1.18e4
  • 1.18e4
63.62621
  • 63.62621
  • 63.62621
  • 62.48816
  • 59.98986
  • 59.98986
  • 59.98986
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007269pectoral appendage musculature
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
1.09e4
  • 1.09e4
  • 1.09e4
  • 1.30e4
  • 1.30e4
63.13761
  • 63.13761
  • 63.13761
  • 56.22973
  • 56.22973
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.12e4
  • 1.12e4
62.31192
  • 62.31192
AEIR
  • AEIR
UBERON:0001555digestive tract
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
1.20e4
  • 1.20e4
  • 1.25e4
  • 1.27e4
  • 1.27e4
  • 1.38e4
  • 1.48e4
  • 1.48e4
59.35640
  • 59.35640
  • 57.67708
  • 57.12595
  • 57.12595
  • 53.31307
  • 49.98141
  • 49.97972
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003050olfactory placode
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
1.33e4
  • 1.33e4
  • 1.40e4
  • 1.40e4
54.97294
  • 54.97294
  • 52.75244
  • 52.75244
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003069otic placode
  • ZFS:0000026Segmentation:14-19 somites
1.40e4
  • 1.40e4
52.60453
  • 52.60453
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLCU929426, FP102778, FP243387
EnsemblENSDARG00000022309 (dspa)
Uniprot/SPTREMBLF1RBA4, F1RBA4_DANRE, F8W4Q1, F8W4Q1_DANRE
ZFINZDB-GENE-030131-2743 (dspa)

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