D. rerio Gene: si:ch211-156l18.7 - ENSDARG00000022334 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000022334
Namesi:ch211-156l18.7
Descriptionsi:ch211-156l18.7 [Source:ZFIN;Acc:ZDB-GENE-130530-566]
OrganismDanio rerio (zebrafish)
Synonym(s)zmp:0000000563
Paralog(s)10 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
8.89e3
  • 8.89e3
70.25
  • 70.25
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
1.43e4
  • 1.43e4
52.07
  • 52.07
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
1.71e4
  • 1.71e4
42.63
  • 42.63
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.96e4
  • 1.96e4
34.26
  • 34.26
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
2.45e4
  • 2.45e4
  • 2.50e4
  • 2.77e4
18.07
  • 18.07
  • 16.35
  • 7.41
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.45e4
  • 2.45e4
17.92
  • 17.92
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Paralogs (same species)

Paralogy information comes from OMA : ENSDARG00000022334.

Cross-references

EnsemblENSDARG00000022334 (si:ch211-156l18.7)
ZFINZDB-GENE-130530-566 (si:ch211-156l18.7)
EMBLBX469912
Uniprot/SPTREMBLE7F6W3, E7F6W3_DANRE, F1QHM2, F1QHM2_DANRE

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