D. rerio Gene: clcnk - ENSDARG00000022560 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000022560
Nameclcnk
Descriptionchloride channel K [Source:ZFIN;Acc:ZDB-GENE-040426-1379]
OrganismDanio rerio (zebrafish)
Synonym(s)cic-k, zgc:64141
Orthologs(s)21 orthologs
Paralog(s)6 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
4.64e3
  • 4.64e3
84.47
  • 84.47
AEIR
  • AEIR
ZFA:0001624pronephric distal late tubule (Danio)
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000028Segmentation:26+ somites
5.97e3
  • 5.97e3
  • 1.49e4
  • 1.49e4
80.00
  • 80.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007308pronephric distal early tubule
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000106zygote stage
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000028Segmentation:26+ somites
8.96e3
  • 8.96e3
  • 1.49e4
  • 1.49e4
  • 1.49e4
70.00
  • 70.00
  • 50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003060pronephric duct
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000028Segmentation:26+ somites
8.96e3
  • 8.96e3
  • 1.19e4
  • 1.25e4
  • 1.31e4
  • 1.31e4
  • 1.32e4
  • 1.34e4
  • 1.40e4
  • 1.42e4
69.98
  • 69.98
  • 60.00
  • 58.31
  • 56.23
  • 56.23
  • 55.86
  • 54.97
  • 53.10
  • 52.60
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
9.71e3
  • 9.71e3
67.48
  • 67.48
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.02e4
  • 1.02e4
65.80
  • 65.80
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.06e4
  • 1.06e4
64.55
  • 64.55
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.09e4
  • 1.09e4
63.40
  • 63.40
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.23e4
  • 1.23e4
58.84
  • 58.84
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.26e4
  • 1.26e4
  • 1.62e4
57.93
  • 57.93
  • 45.62
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.28e4
  • 1.28e4
57.10
  • 57.10
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
1.42e4
  • 1.42e4
  • 1.45e4
  • 1.69e4
  • 2.00e4
52.30
  • 52.30
  • 51.40
  • 43.47
  • 32.93
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2002225posterior pronephric duct
  • ZFS:0000028Segmentation:26+ somites
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.66e4
  • 1.66e4
  • 1.79e4
44.46
  • 44.46
  • 40.08
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
1.85e4
  • 1.85e4
37.90
  • 37.90
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.10e4
  • 2.10e4
29.75
  • 29.75
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.27e4
  • 2.27e4
23.93
  • 23.93
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.48e4
  • 2.48e4
17.09
  • 17.09
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Eukaryota6 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000022560.

Cross-references

EnsemblENSDARG00000022560 (clcnk)
ZFINZDB-GENE-040426-1379 (clcnk)
Uniprot/SPTREMBLF1QAS1, F1QAS1_DANRE

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