D. rerio Gene: armc2 - ENSDARG00000022660 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000022660
Namearmc2
Descriptionarmadillo repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-041014-7]
OrganismDanio rerio (zebrafish)
Synonym(s)dkey-222o17.3, si:dkey-222o17.2
Orthologs(s)19 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000066fully formed stage
5.75e3
  • 5.75e3
80.77
  • 80.77
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.13e4
  • 1.13e4
62.06
  • 62.06
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.19e4
  • 1.19e4
60.31
  • 60.31
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.27e4
  • 1.27e4
57.57
  • 57.57
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.38e4
  • 1.38e4
  • 1.69e4
53.70
  • 53.70
  • 43.40
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.49e4
  • 1.49e4
50.09
  • 50.09
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.50e4
  • 1.50e4
  • 2.30e4
49.70
  • 49.70
  • 22.97
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.69e4
  • 1.69e4
43.40
  • 43.40
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.75e4
  • 1.75e4
41.45
  • 41.45
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
1.78e4
  • 1.78e4
  • 1.87e4
  • 1.88e4
  • 1.93e4
  • 2.09e4
40.42
  • 40.42
  • 37.37
  • 37.04
  • 35.27
  • 29.96
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.85e4
  • 1.85e4
  • 1.87e4
37.97
  • 37.97
  • 37.35
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.88e4
  • 1.88e4
37.19
  • 37.19
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.97e4
  • 1.97e4
34.20
  • 34.20
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
2.01e4
  • 2.01e4
32.66
  • 32.66
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.12e4
  • 2.12e4
29.11
  • 29.11
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.12e4
  • 2.12e4
28.99
  • 28.99
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Cross-references

EnsemblENSDARG00000022660 (armc2)
ZFINZDB-GENE-041014-7 (armc2)
EMBLBX842669
Uniprot/SPTREMBLF1QBI9, F1QBI9_DANRE

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