D. rerio Gene: zgc:175214 - ENSDARG00000022891 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000022891
Namezgc:175214
Descriptionzgc:175214 [Source:ZFIN;Acc:ZDB-GENE-080303-32]
OrganismDanio rerio (zebrafish)
Paralog(s)3 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.56e3
  • 1.56e3
94.79
  • 94.79
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
2.11e3
  • 2.11e3
92.93
  • 92.93
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000036Larval:Day 4
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
2.96e3
  • 2.96e3
  • 6.28e3
  • 6.38e3
  • 6.39e3
  • 7.34e3
  • 7.70e3
  • 7.89e3
  • 8.12e3
  • 8.69e3
  • 1.06e4
  • 1.11e4
  • 1.27e4
  • 1.43e4
  • 1.44e4
  • 1.47e4
90.08
  • 90.08
  • 78.98
  • 78.64
  • 78.59
  • 75.41
  • 74.20
  • 73.57
  • 72.80
  • 70.90
  • 64.61
  • 62.74
  • 57.33
  • 52.04
  • 51.88
  • 50.68
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
3.04e3
  • 3.04e3
  • 3.52e3
  • 4.22e3
  • 7.63e3
89.82
  • 89.82
  • 88.23
  • 85.87
  • 74.45
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000024Segmentation:5-9 somites
3.04e3
  • 3.04e3
  • 3.18e3
  • 4.71e3
  • 5.23e3
  • 6.14e3
  • 6.49e3
  • 6.63e3
  • 6.74e3
  • 7.87e3
  • 9.59e3
89.81
  • 89.81
  • 89.37
  • 84.23
  • 82.47
  • 79.43
  • 78.28
  • 77.79
  • 77.43
  • 73.65
  • 67.89
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
3.08e3
  • 3.08e3
89.69
  • 89.69
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
3.19e3
  • 3.19e3
89.33
  • 89.33
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
3.21e3
  • 3.21e3
89.27
  • 89.27
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
3.45e3
  • 3.45e3
88.46
  • 88.46
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
3.51e3
  • 3.51e3
  • 4.70e3
88.25
  • 88.25
  • 84.26
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
3.55e3
  • 3.55e3
  • 5.76e3
88.12
  • 88.12
  • 80.73
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
3.79e3
  • 3.79e3
87.33
  • 87.33
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
3.83e3
  • 3.83e3
87.17
  • 87.17
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
3.95e3
  • 3.95e3
86.77
  • 86.77
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
4.06e3
  • 4.06e3
86.41
  • 86.41
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
4.66e3
  • 4.66e3
84.39
  • 84.39
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
4.88e3
  • 4.88e3
  • 5.27e3
  • 6.69e3
83.66
  • 83.66
  • 82.35
  • 77.59
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
4.90e3
  • 4.90e3
83.60
  • 83.60
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
5.00e3
  • 5.00e3
  • 7.46e3
83.25
  • 83.25
  • 75.01
AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
5.58e3
  • 5.58e3
81.32
  • 81.32
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
5.88e3
  • 5.88e3
  • 8.00e3
80.32
  • 80.32
  • 73.23
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
9.06e3
  • 9.06e3
69.65
  • 69.65
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
9.14e3
  • 9.14e3
  • 1.10e4
  • 1.31e4
  • 1.32e4
  • 1.56e4
  • 1.75e4
69.39
  • 69.39
  • 63.30
  • 56.03
  • 55.76
  • 47.80
  • 41.42
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.19e4
  • 1.19e4
60.01
  • 60.01
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000066fully formed stage
1.34e4
  • 1.34e4
  • 1.50e4
55.16
  • 55.16
  • 49.94
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.38e4
  • 1.38e4
53.86
  • 53.86
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
1.69e4
  • 1.69e4
43.56
  • 43.56
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.70e4
  • 1.70e4
43.08
  • 43.08
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata3 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000022891.

Cross-references

EnsemblENSDARG00000022891 (zgc:175214)
ZFINZDB-GENE-080303-32 (zgc:175214)
EMBLBC159258, CR812943
Uniprot/SPTREMBLB0JZN6, B0JZN6_DANRE

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