D. rerio Gene: pkp2 - ENSDARG00000023026 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000023026
Namepkp2
Descriptionplakophilin 2 [Source:ZFIN;Acc:ZDB-GENE-041210-167]
OrganismDanio rerio (zebrafish)
Synonym(s)si:ch211-11c20.1

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreSources
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.07e3
  • 2.07e3
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
2.28e3
  • 2.28e3
  • 6.86e3
  • 1.40e4
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
2.53e3
  • 2.53e3
  • 6.73e3
  • 7.40e3
  • 7.84e3
  • 1.49e4
  • 1.49e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
6.88e3
  • 6.88e3
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
7.14e3
  • 7.14e3
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.01e4
  • 1.01e4
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.03e4
  • 1.03e4
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
1.10e4
  • 1.10e4
  • 1.29e4
  • 1.36e4
  • 1.71e4
  • 1.77e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.20e4
  • 1.20e4
  • 1.74e4
AEIR
  • AEIR
  • AEIR
UBERON:0001003skin epidermis
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
1.27e4
  • 1.27e4
  • 1.31e4
  • 1.41e4
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.29e4
  • 1.29e4
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.38e4
  • 1.38e4
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.42e4
  • 1.42e4
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.44e4
  • 1.44e4
AEIR
  • AEIR
CL:0000710neurecto-epithelial cell
  • ZFS:0000029Pharyngula:Prim-5
1.48e4
  • 1.48e4
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.48e4
  • 1.48e4
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.59e4
  • 1.59e4
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.75e4
  • 1.75e4
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.79e4
  • 1.79e4
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.85e4
  • 1.85e4
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation
Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.
Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

EMBLAM906170, BX001012
EnsemblENSDARG00000023026 (pkp2)
Uniprot/SPTREMBLB0BF33, B0BF33_DANRE, Q5RJ81, Q5RJ81_DANRE
ZFINZDB-GENE-041210-167 (pkp2)

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