D. rerio Gene: pcp4l1 - ENSDARG00000023181 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000023181
Namepcp4l1
DescriptionPurkinje cell protein 4 like 1 [Source:ZFIN;Acc:ZDB-GENE-040724-35]
OrganismDanio rerio (zebrafish)
Synonym(s)bz1g18.14, loc100008021, si:rp71-1g18.14, si:rp71-1g18.14gn

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
992
  • 992
  • 3.69e3
96.68
  • 96.68
  • 87.63
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.03e3
  • 1.03e3
96.57
  • 96.57
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
1.12e3
  • 1.12e3
  • 5.38e3
  • 9.59e3
96.24
  • 96.24
  • 81.99
  • 67.88
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
1.67e3
  • 1.67e3
  • 1.40e4
94.43
  • 94.43
  • 53.02
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
2.96e3
  • 2.96e3
  • 5.40e3
  • 1.35e4
  • 1.42e4
  • 1.73e4
  • 1.73e4
  • 1.91e4
90.09
  • 90.09
  • 81.94
  • 54.73
  • 52.42
  • 42.21
  • 41.94
  • 36.16
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
5.56e3
  • 5.56e3
81.38
  • 81.38
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
6.80e3
  • 6.80e3
  • 1.03e4
  • 1.27e4
77.23
  • 77.23
  • 65.62
  • 57.52
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
7.17e3
  • 7.17e3
76.01
  • 76.01
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000017Gastrula:50%-epiboly
7.91e3
  • 7.91e3
  • 9.62e3
  • 1.05e4
  • 1.28e4
  • 1.29e4
  • 1.30e4
73.52
  • 73.52
  • 67.80
  • 64.96
  • 57.03
  • 56.64
  • 56.64
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000036Larval:Day 4
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000033Hatching:Long-pec
7.98e3
  • 7.98e3
  • 1.01e4
  • 1.04e4
  • 1.06e4
  • 1.13e4
  • 1.18e4
  • 1.22e4
  • 1.31e4
  • 1.37e4
  • 1.37e4
  • 1.38e4
  • 1.38e4
73.29
  • 73.29
  • 66.13
  • 65.05
  • 64.51
  • 62.24
  • 60.48
  • 59.04
  • 56.29
  • 54.24
  • 54.23
  • 53.76
  • 53.76
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
9.29e3
  • 9.29e3
68.91
  • 68.91
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.07e4
  • 1.07e4
64.27
  • 64.27
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000011Blastula:1k-cell
1.10e4
  • 1.10e4
  • 1.26e4
  • 1.83e4
63.21
  • 63.21
  • 57.68
  • 38.84
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
1.27e4
  • 1.27e4
57.52
  • 57.52
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.43e4
  • 1.43e4
52.22
  • 52.22
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.45e4
  • 1.45e4
51.47
  • 51.47
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.61e4
  • 1.61e4
46.10
  • 46.10
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.66e4
  • 1.66e4
44.36
  • 44.36
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.69e4
  • 1.69e4
43.36
  • 43.36
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.70e4
  • 1.70e4
43.17
  • 43.17
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
1.70e4
  • 1.70e4
43.11
  • 43.11
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.75e4
  • 1.75e4
41.54
  • 41.54
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EnsemblENSDARG00000023181 (pcp4l1)
ZFINZDB-GENE-040724-35 (pcp4l1)
EMBLAL627248, BC162193, BC162205, CR376839
Uniprot/SPTREMBLQ7T133, Q7T133_DANRE

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